RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 CD93Q9NPY3 652 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 VPS28Q9UK41 221 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 USP18Q9UMW8 372 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 AP4E1Q9UPM8 1137 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 NEU3Q9UQ49 428 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 NUP205Q92621 2012 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 ILVBLA1L0T0 632 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 PRR23AA6NEV1 266 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 ZBTB24O43167 697 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-213ENST00000568158 SIN3BO75182 1162 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 MT-CO1P00395 513 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 BCKDHBP21953 392 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 EPHB2P29323 1055 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 PCK1P35558 622 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 ACVRL1P37023 503 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 MAGEA1P43355 309 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 MRE11P49959 708 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 COPAP53621 1224 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 AIF1P55008 147 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 GNA12Q03113 381 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 SULT2A1Q06520 285 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 SEMA3BQ13214 749 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 CAMK2GQ13555 558 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-213ENST00000568158 MAP7D1Q3KQU3 841 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 KCNT1Q5JUK3 1230 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 C6orf118Q5T5N4 469 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 KIAA1324Q6UXG2 1013 aaKnown RBP13.34□□□□□ -0.27
CNOT1-213ENST00000568158 KBTBD6Q86V97 674 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 FAM160A2Q8N612 972 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-213ENST00000568158 PANX2Q96RD6 677 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 EPC1Q9H2F5 836 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 ZWILCHQ9H900 591 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 PRDM16Q9HAZ2 1276 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 TMEM248Q9NWD8 314 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 TFR2Q9UP52 801 aa13.34□□□□□ -0.27
CNOT1-213ENST00000568158 TMEM110-MUSTN1A8MSY1 372 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 K7ERQ8 282 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 GFRA3O60609 400 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 RARAP10276 462 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 VAV1P15498 845 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 CDC25BP30305 580 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 NNMTP40261 264 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 P2RY2P41231 377 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 SSR1P43307 286 aaKnown RBP13.33□□□□□ -0.28
CNOT1-213ENST00000568158 KRT83P78385 493 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 SMTNL2Q2TAL5 461 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 HNRNPA1L2Q32P51 320 aaKnown RBP13.33□□□□□ -0.28
CNOT1-213ENST00000568158 ACCSLQ4AC99 568 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 ATP13A4Q4VNC1 1196 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 BOLA3Q53S33 107 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 C9orf64Q5T6V5 341 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 LINGO4Q6UY18 593 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 DCLK2Q8N568 766 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 NIPA2Q8N8Q9 360 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 KDM1BQ8NB78 822 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 OR2T3Q8NH03 318 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 HSPH1Q92598 858 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 PTPRN2Q92932 1015 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 ARHGEF2Q92974 986 aaKnown RBP13.33□□□□□ -0.28
CNOT1-213ENST00000568158 SIPA1Q96FS4 1042 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 EPAS1Q99814 870 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 NCAPGQ9BPX3 1015 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 DUSP15Q9H1R2 295 aaPredicted RBP13.33□□□□□ -0.28
CNOT1-213ENST00000568158 ITM2CQ9NQX7 267 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 UVRAGQ9P2Y5 699 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 VPS51Q9UID3 782 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 MBD1Q9UIS9 605 aaPredicted RBP13.33□□□□□ -0.28
CNOT1-213ENST00000568158 SLC25A13Q9UJS0 675 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 ACTL7AQ9Y615 435 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 EPN1Q9Y6I3 576 aaPredicted RBP13.33□□□□□ -0.28
CNOT1-213ENST00000568158 CKAP5Q14008 2032 aa13.33□□□□□ -0.28
CNOT1-213ENST00000568158 MUC22E2RYF6 1773 aaPredicted RBP13.32□□□□□ -0.28
CNOT1-213ENST00000568158 THADAQ6YHU6 1953 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 TARSL2A2RTX5 802 aaKnown RBP13.32□□□□□ -0.28
CNOT1-213ENST00000568158 SOWAHDA6NJG2 315 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 WASH4PA8MWX3 477 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 CBX4O00257 560 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 EEF2KO00418 725 aaKnown RBP13.32□□□□□ -0.28
CNOT1-213ENST00000568158 SMAD6O43541 496 aaKnown RBP13.32□□□□□ -0.28
CNOT1-213ENST00000568158 ZMPSTE24O75844 475 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 PROSCO94903 275 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 LCA5LO95447 670 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 SRCP12931 536 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 GOT1P17174 413 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 MAPKAPK2P49137 400 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 TPI1P60174 286 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 MESDQ14696 234 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 DLG2Q15700 870 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 PLK5Q496M5 336 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 PPP6R3Q5H9R7 873 aaPredicted RBP13.32□□□□□ -0.28
CNOT1-213ENST00000568158 IL31Q6EBC2 164 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 RAD9BQ6WBX8 426 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 ZNF783Q6ZMS7 281 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 CACUL1Q86Y37 369 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 TMTC1Q8IUR5 882 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 CCDC170Q8IYT3 715 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 STK40Q8N2I9 435 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 DEFB119Q8N690 84 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 RTL3Q8N8U3 475 aaKnown RBP13.32□□□□□ -0.28
CNOT1-213ENST00000568158 NETO2Q8NC67 525 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms