RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 SPDYAQ5MJ70 313 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 LRRC74BQ6ZQY2 392 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 SNX32Q86XE0 403 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 TOP6BLQ8N6T0 577 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 SPATA22Q8NHS9 363 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 SLC35F5Q8WV83 523 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 KCTD4Q8WVF5 259 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 QKIQ96PU8 341 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDH1-210ENST00000566612 TBL1YQ9BQ87 522 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 CENPKQ9BS16 269 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 PHACTR1Q9C0D0 580 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 LRMDAQ9H2I8 198 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 DENND2DQ9H6A0 471 aaPredicted RBP11.81□□□□□ -0.52
CDH1-210ENST00000566612 RRN3Q9NYV6 651 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 CDH9Q9ULB4 789 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 GNGT2O14610 69 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 GSC2O15499 205 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 PSMG1O95456 288 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 PIRTP0C851 137 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 SLC2A3P11169 496 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 SKIV2L2P42285 1042 aaKnown RBP11.81□□□□□ -0.52
CDH1-210ENST00000566612 SCNN1BP51168 640 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 CYLC2Q14093 348 aaPredicted RBP11.81□□□□□ -0.52
CDH1-210ENST00000566612 DDR2Q16832 855 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 TIGD7Q6NT04 549 aaPredicted RBP11.81□□□□□ -0.52
CDH1-210ENST00000566612 HFE2Q6ZVN8 426 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 MIPOL1Q8TD10 442 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 NDNQ99608 321 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 RHOBTB2Q9BYZ6 727 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 IL22Q9GZX6 179 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 CNGB3Q9NQW8 809 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 ZNF358Q9NW07 568 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 DSEQ9UL01 958 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 CNTN6Q9UQ52 1028 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 GLTPD2A6NH11 291 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 ANGPT2O15123 496 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 MPOP05164 745 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 C2P06681 752 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 TSPAN8P19075 237 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 EPHA3P29320 983 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 CDH5P33151 784 aaPredicted RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 PLIN5Q00G26 463 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 ZRANB3Q5FWF4 1079 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 SWT1Q5T5J6 900 aaKnown RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 NEPROQ6NW34 567 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 PQLC3Q8N755 202 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 UTP6Q9NYH9 597 aaKnown RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 SLC4A7Q9Y6M7 1214 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 GCATO75600 419 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 XPAP23025 273 aaPredicted RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 OR1E1P30953 314 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 CSE1LP55060 971 aaKnown RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 PKNOX1P55347 436 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 DLG2Q15700 870 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 NFE2Q16621 373 aaPredicted RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 LRRC8BQ6P9F7 803 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 NPLOC4Q8TAT6 608 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 FCRL2Q96LA5 508 aaPredicted RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 ACE2Q9BYF1 805 aaPredicted RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 PTPRHQ9HD43 1115 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 PLA2G4CQ9UP65 541 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 FAM95CA0A1B0GW59 222 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 SNAI1O95863 264 aaPredicted RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 TPSB2P20231 275 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 EEF1B2P24534 225 aaKnown RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 MSX2P35548 267 aaPredicted RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 HARS2P49590 506 aaKnown RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 PPM1FP49593 454 aaPredicted RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 RENBPP51606 427 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 PITX1P78337 314 aaPredicted RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 TPSAB1Q15661 275 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 AGKQ53H12 422 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 GIPC2Q8TF65 315 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 FGD4Q96M96 766 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 EFCAB1Q9HAE3 211 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 TEX264Q9Y6I9 313 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 V9GYQ6 96 aa11.8□□□□□ -0.52
CDH1-210ENST00000566612 GOLGA4Q13439 2230 aaKnown RBP11.8□□□□□ -0.52
CDH1-210ENST00000566612 IGKV6-21A0A0C4DH24 114 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 ERI2A8K979 691 aaKnown RBP11.79□□□□□ -0.52
CDH1-210ENST00000566612 GSTA4O15217 222 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 LRIG2O94898 1065 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 DSG1Q02413 1049 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 DPYSL2Q16555 572 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 C10orf82Q8WW14 230 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 ULK4Q96C45 1275 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 KLHL5Q96PQ7 755 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 AGAP2Q99490 1192 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 VAT1Q99536 393 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 C16orf70Q9BSU1 422 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 BEGAINQ9BUH8 593 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 WDR55Q9H6Y2 383 aaPredicted RBP11.79□□□□□ -0.52
CDH1-210ENST00000566612 PIGVQ9NUD9 493 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 PCDHB7Q9Y5E2 793 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 NHSQ6T4R5 1651 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.79□□□□□ -0.52
CDH1-210ENST00000566612 RAMP2O60895 175 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 SEC24DO94855 1032 aaPredicted RBP11.79□□□□□ -0.52
CDH1-210ENST00000566612 MT-CYBP00156 380 aaPredicted RBP11.79□□□□□ -0.52
CDH1-210ENST00000566612 ACADSP16219 412 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms