RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 FEM1AQ9BSK4 669 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 PDCL3Q9H2J4 239 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 LMBRD1Q9NUN5 540 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 RRN3Q9NYV6 651 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.85■□□□□ 0.61
USB1-213ENST00000566292 BTBD3Q9Y2F9 522 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.84■□□□□ 0.61
USB1-213ENST00000566292 LRRC72A6NJI9 287 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 CNTN5O94779 1100 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 IL1BP01584 269 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 GOT1P17174 413 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 EEF1GP26641 437 aaKnown RBP18.84■□□□□ 0.61
USB1-213ENST00000566292 DRD3P35462 400 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 CTSKP43235 329 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 CXCR3P49682 368 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 VASPP50552 380 aaPredicted RBP18.84■□□□□ 0.61
USB1-213ENST00000566292 ADPRHP54922 357 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 RACK1P63244 317 aaKnown RBP18.84■□□□□ 0.61
USB1-213ENST00000566292 ZNF177Q13360 481 aaPredicted RBP18.84■□□□□ 0.61
USB1-213ENST00000566292 C2CD6Q53TS8 623 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 CT47A1Q5JQC4 288 aaPredicted RBP18.84■□□□□ 0.61
USB1-213ENST00000566292 BRMS1LQ5PSV4 323 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 CLEC17AQ6ZS10 378 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 SND1Q7KZF4 910 aaKnown RBP eCLIP18.84■□□□□ 0.61
USB1-213ENST00000566292 NOP9Q86U38 636 aaKnown RBP18.84■□□□□ 0.61
USB1-213ENST00000566292 SLCO6A1Q86UG4 719 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 ZNF683Q8IZ20 524 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 ADAMTS14Q8WXS8 1223 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 C18orf8Q96DM3 657 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 PGAP3Q96FM1 320 aaPredicted RBP18.84■□□□□ 0.61
USB1-213ENST00000566292 TBCBQ99426 244 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 TKTL2Q9H0I9 626 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 WDCPQ9H6R7 721 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 TAB2Q9NYJ8 693 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 TBC1D30Q9Y2I9 924 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 SNX10Q9Y5X0 201 aa18.84■□□□□ 0.61
USB1-213ENST00000566292 TMEM8BA6NDV4 472 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 H0Y8X5 98 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 PLK4O00444 970 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 FLRT2O43155 660 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 ATP9BO43861 1147 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 CLDN11O75508 207 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 WNT1P04628 370 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 FLT3P36888 993 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 SCNN1AP37088 669 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 CDH4P55283 916 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 ALFQ53S48 1182 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 FAM102AQ5T9C2 384 aaPredicted RBP18.83■□□□□ 0.6
USB1-213ENST00000566292 TRNP1Q6NT89 227 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 ADAT2Q7Z6V5 191 aaKnown RBP18.83■□□□□ 0.6
USB1-213ENST00000566292 ERICH1Q86X53 443 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 OR14C36Q8NHC7 312 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 EPS8L1Q8TE68 723 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 SPAG5Q96R06 1193 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 STK33Q9BYT3 514 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 GANQ9H2C0 597 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 TMPRSS4Q9NRS4 437 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 TOR4AQ9NXH8 423 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 SLC25A13Q9UJS0 675 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 SARDHQ9UL12 918 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 STAP1Q9ULZ2 295 aa18.83■□□□□ 0.6
USB1-213ENST00000566292 F8VZ95 297 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 WNT9AO14904 365 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 VILLO15195 856 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 MMEP08473 750 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 CCR5P51681 352 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 NOMO3P69849 1222 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 DEUP1Q05D60 604 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 DLG2Q15700 870 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 SLC25A52Q3SY17 297 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 ACCSLQ4AC99 568 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 ARTNQ5T4W7 220 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 ENOX1Q8TC92 643 aaKnown RBP18.82■□□□□ 0.6
USB1-213ENST00000566292 RHBDD1Q8TEB9 315 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 FAM131CQ96AQ9 280 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 PPP1R9BQ96SB3 815 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 PSMB7Q99436 277 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 VPS28Q9UK41 221 aa18.82■□□□□ 0.6
USB1-213ENST00000566292 LSM8O95777 96 aaKnown RBP18.81■□□□□ 0.6
USB1-213ENST00000566292 F9P00740 461 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 KLK7P49862 253 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 PPP2CBP62714 309 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 PPP2CAP67775 309 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 SUZ12Q15022 739 aaKnown RBP18.81■□□□□ 0.6
USB1-213ENST00000566292 CDKAL1Q5VV42 579 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.81■□□□□ 0.6
USB1-213ENST00000566292 Q6ZVU0 165 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 BNIPLQ7Z465 357 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 SH2D3CQ8N5H7 860 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 SLC20A1Q8WUM9 679 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 CPA5Q8WXQ8 436 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 OR8D1Q8WZ84 308 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 ACE2Q9BYF1 805 aaPredicted RBP18.81■□□□□ 0.6
USB1-213ENST00000566292 MUC3BQ9H195 1237 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 VPS16Q9H269 839 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 TMEM59LQ9UK28 342 aa18.81■□□□□ 0.6
USB1-213ENST00000566292 APOBEC2Q9Y235 224 aaKnown RBP18.81■□□□□ 0.6
USB1-213ENST00000566292 DMXL2Q8TDJ6 3036 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 A0A1W2PR77 199 aa18.8■□□□□ 0.6
USB1-213ENST00000566292 DRGXA6NNA5 263 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms