RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 Q6ZVU0 165 aa12.28□□□□□ -0.44
FANCA-218ENST00000565582 SND1Q7KZF4 910 aaKnown RBP eCLIP12.28□□□□□ -0.44
FANCA-218ENST00000565582 SLC26A9Q7LBE3 791 aa12.28□□□□□ -0.44
FANCA-218ENST00000565582 GATAD2AQ86YP4 633 aa12.28□□□□□ -0.44
FANCA-218ENST00000565582 FAM71AQ8IYT1 594 aa12.28□□□□□ -0.44
FANCA-218ENST00000565582 FRS2Q8WU20 508 aa12.28□□□□□ -0.44
FANCA-218ENST00000565582 TUBGCP2Q9BSJ2 902 aa12.28□□□□□ -0.44
FANCA-218ENST00000565582 ACE2Q9BYF1 805 aaPredicted RBP12.28□□□□□ -0.44
FANCA-218ENST00000565582 CHMP5Q9NZZ3 219 aa12.28□□□□□ -0.44
FANCA-218ENST00000565582 ADAMTS1Q9UHI8 967 aa12.28□□□□□ -0.44
FANCA-218ENST00000565582 VPS28Q9UK41 221 aa12.28□□□□□ -0.44
FANCA-218ENST00000565582 SARDHQ9UL12 918 aa12.28□□□□□ -0.44
FANCA-218ENST00000565582 PCDHGB2Q9Y5G2 931 aa12.28□□□□□ -0.44
FANCA-218ENST00000565582 ANKRD11Q6UB99 2663 aaPredicted RBP12.28□□□□□ -0.44
FANCA-218ENST00000565582 GOLGA8SH3BPF8 625 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 CBX4O00257 560 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 TAF4O00268 1085 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 VILLO15195 856 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 SNAP91O60641 907 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 CYP11B1P15538 503 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 GOT1P17174 413 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 C5AR1P21730 350 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 MAT2AP31153 395 aaKnown RBP12.27□□□□□ -0.45
FANCA-218ENST00000565582 NOS2P35228 1153 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 NNMTP40261 264 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 RACK1P63244 317 aaKnown RBP12.27□□□□□ -0.45
FANCA-218ENST00000565582 KCNMA1Q12791 1236 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 SLC12A1Q13621 1099 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 DRAP1Q14919 205 aaPredicted RBP12.27□□□□□ -0.45
FANCA-218ENST00000565582 ALFQ53S48 1182 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 FAM102AQ5T9C2 384 aaPredicted RBP12.27□□□□□ -0.45
FANCA-218ENST00000565582 DBX2Q6ZNG2 339 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 TFAP2DQ7Z6R9 452 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 FAM114A1Q8IWE2 563 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 MDM1Q8TC05 714 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 SERAC1Q96JX3 654 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 SPAG5Q96R06 1193 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 TBCBQ99426 244 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 NPY6RQ99463 290 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 FEM1AQ9BSK4 669 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 TKTL2Q9H0I9 626 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 MUC3BQ9H195 1237 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 PDCL3Q9H2J4 239 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 SAMSN1Q9NSI8 373 aaKnown RBP12.27□□□□□ -0.45
FANCA-218ENST00000565582 TAB2Q9NYJ8 693 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 SLC25A13Q9UJS0 675 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 OR51B4Q9Y5P0 310 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 KNL1Q8NG31 2342 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 FAM208BQ5VWN6 2430 aa12.27□□□□□ -0.45
FANCA-218ENST00000565582 LAMA5O15230 3695 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 CELSR3Q9NYQ7 3312 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 TBC1D3DA0A087WVF3 549 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 TBC1D3IA0A087WXS9 549 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 TBC1D3EA0A087X179 549 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 TBC1D3KA0A087X1G2 549 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.26□□□□□ -0.45
FANCA-218ENST00000565582 A0A1B0GTQ1 180 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 FAM149AA5PLN7 773 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 TBC1D3FA6NER0 549 aaPredicted RBP12.26□□□□□ -0.45
FANCA-218ENST00000565582 C10orf142B7Z368 130 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 TBC1D3LB9A6J9 549 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 K7ERQ8 282 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 MT-CO1P00395 513 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 RHOCP08134 193 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 TBC1D3HP0C7X1 549 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 FLT3P36888 993 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 GRK6P43250 576 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 CCR5P51681 352 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 PLK1P53350 603 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 CLDN6P56747 220 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 SULT2A1Q06520 285 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 CNTN1Q12860 1018 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 SFSWAPQ12872 951 aaKnown RBP12.26□□□□□ -0.45
FANCA-218ENST00000565582 ZNF177Q13360 481 aaPredicted RBP12.26□□□□□ -0.45
FANCA-218ENST00000565582 SHBQ15464 509 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 DLG2Q15700 870 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 KLHDC7AQ5VTJ3 777 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 TBC1D3GQ6DHY5 549 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 TBC1D3CQ6IPX1 549 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 TRNP1Q6NT89 227 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 LRSAM1Q6UWE0 723 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 CCNI2Q6ZMN8 369 aaPredicted RBP12.26□□□□□ -0.45
FANCA-218ENST00000565582 NOP9Q86U38 636 aaKnown RBP12.26□□□□□ -0.45
FANCA-218ENST00000565582 XYLT1Q86Y38 959 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 TBC1D3Q8IZP1 549 aaPredicted RBP12.26□□□□□ -0.45
FANCA-218ENST00000565582 TMEM35BQ8NCS4 154 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 ZNF397Q8NF99 534 aaPredicted RBP12.26□□□□□ -0.45
FANCA-218ENST00000565582 OR8D1Q8WZ84 308 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 PSMB7Q99436 277 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 CDC6Q99741 560 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 NUP62CLQ9H1M0 184 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.26□□□□□ -0.45
FANCA-218ENST00000565582 MPP6Q9NZW5 540 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 CA5BQ9Y2D0 317 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 PLXNB3Q9ULL4 1909 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 PTPRBP23467 1997 aa12.26□□□□□ -0.45
FANCA-218ENST00000565582 A0A1W2PR77 199 aa12.25□□□□□ -0.45
FANCA-218ENST00000565582 RNF103O00237 685 aa12.25□□□□□ -0.45
FANCA-218ENST00000565582 ATP9BO43861 1147 aa12.25□□□□□ -0.45
FANCA-218ENST00000565582 PCDHGA12O60330 932 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms