RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 MUSKO15146 869 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 IRAK2O43187 625 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 MZF1P28698 734 aaPredicted RBP9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 DRD3P35462 400 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 TXLNAP40222 546 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 CD97P48960 835 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 AP3M2P53677 418 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 OXCT1P55809 520 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 YWHAGP61981 247 aaKnown RBP eCLIP9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 ECT2LQ008S8 904 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 CACNA1DQ01668 2161 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 CEBPZQ03701 1054 aaKnown RBP9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 CYP24A1Q07973 514 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 CCDC15Q0P6D6 951 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 BIRC3Q13489 604 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 ELAVL3Q14576 367 aaKnown RBP9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 PIK3R6Q5UE93 754 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 NEK5Q6P3R8 708 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 SCARA5Q6ZMJ2 495 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 Q6ZSR6 202 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 VASH2Q86V25 355 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 MFN1Q8IWA4 741 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 TMEM145Q8NBT3 493 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 OR13H1Q8NG92 308 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 RNF139Q8WU17 664 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 PTPRN2Q92932 1015 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 MIB2Q96AX9 1013 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 DNAJC19Q96DA6 116 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 SPATA32Q96LK8 384 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 SPAG5Q96R06 1193 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 DUSP16Q9BY84 665 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 UBXN6Q9BZV1 441 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 EPB41L5Q9HCM4 733 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 PREBQ9HCU5 417 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 PANK4Q9NVE7 773 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 STIM2Q9P246 746 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 CCDC39Q9UFE4 941 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 IPO11Q9UI26 975 aaKnown RBP9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 SLCO3A1Q9UIG8 710 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 FBXO2Q9UK22 296 aaPredicted RBP9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 CENPEQ02224 2701 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 A0A1W2PQ27 194 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 A0A1W2PQ64 194 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 A0A1W2PQC6 194 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 TYW5A2RUC4 315 aaKnown RBP9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 CSF2P04141 144 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 HNRNPA2B1P22626 353 aaKnown RBP9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 CD82P27701 267 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 TNFRSF8P28908 595 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 SLC11A2P49281 568 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 NCOA4Q13772 614 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 CLEC17AQ6ZS10 378 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 ZFAND4Q86XD8 727 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 ZNF548Q8NEK5 533 aaPredicted RBP9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 C9orf43Q8TAL5 461 aaPredicted RBP9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 SSC4DQ8WTU2 575 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 HTR3CQ8WXA8 447 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 FAM131CQ96AQ9 280 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 TMEM159Q96B96 161 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 LMLNQ96KR4 655 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 TMEM74Q96NL1 305 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 DDX50Q9BQ39 737 aaKnown RBP9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 CCDC3Q9BQI4 270 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 SLC12A9Q9BXP2 914 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 SDCBP2Q9H190 292 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 SYNDIG1Q9H7V2 258 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 ZNF71Q9NQZ8 489 aaPredicted RBP9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 STK17AQ9UEE5 414 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 HS3ST3A1Q9Y663 406 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 POLQO75417 2590 aa9.34□□□□□ -0.91
VPS9D1-205ENST00000565452 MYH10P35580 1976 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 ITIH6Q6UXX5 1313 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 A0A1W2PQU0 124 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 NTN3O00634 580 aaPredicted RBP9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 MTSS1O43312 755 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 AQP9O43315 295 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 VPS4BO75351 444 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 RPN1P04843 607 aaKnown RBP9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 ZNF18P17022 549 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 CMA1P23946 247 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 NOS2P35228 1153 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 ME1P48163 572 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 SNRPFP62306 86 aaKnown RBP9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 CNTN1Q12860 1018 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 DEFB133Q30KQ1 61 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 PERM1Q5SV97 790 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 TMEM164Q5U3C3 297 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 RRAGBQ5VZM2 374 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 ESRP1Q6NXG1 681 aaKnown RBP9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 RFWD3Q6PCD5 774 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 CCDC73Q6ZRK6 1079 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 DTX1Q86Y01 620 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 UNC45BQ8IWX7 931 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 CCDC65Q8IXS2 484 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 XXYLT1Q8NBI6 393 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 WFDC5Q8TCV5 224 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 LMX1AQ8TE12 382 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 BTN2A2Q8WVV5 523 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 OR8D1Q8WZ84 308 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 TAF4BQ92750 862 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms