RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 GALNT5Q7Z7M9 940 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 SPATA24Q86W54 205 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 CCDC33Q8N5R6 958 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 BCAS4Q8TDM0 211 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 SLC47A1Q96FL8 570 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 C9orf72Q96LT7 481 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 PEBP4Q96S96 227 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 HAUS8Q9BT25 410 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 NT5C1AQ9BXI3 368 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 CDC42EP4Q9H3Q1 356 aaKnown RBP9.37□□□□□ -0.91
TCF4-224ENST00000564403 GPATCH2LQ9NWQ4 482 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 CTNNAL1Q9UBT7 734 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 ITGA11Q9UKX5 1188 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 GABRQQ9UN88 632 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 NEU2Q9Y3R4 380 aa9.37□□□□□ -0.91
TCF4-224ENST00000564403 C3orf70A6NLC5 250 aaPredicted RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 APOL1O14791 398 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 MTSS1O43312 755 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 RIPK2O43353 540 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 LIASO43766 372 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 CST8O60676 142 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 ATP2C2O75185 946 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 SERPINB7O75635 380 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 CCDC130P13994 396 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 GALNSP34059 522 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 TMED10P49755 219 aaKnown RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 ATXN1P54253 815 aaKnown RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 YARSP54577 528 aaKnown RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 GDF10P55107 478 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 MLLT6P55198 1093 aaPredicted RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 PIGHQ14442 188 aaPredicted RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 ZBTB6Q15916 424 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 FSCN1Q16658 493 aaKnown RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 MYLK3Q32MK0 819 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 UBXN11Q5T124 520 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 PRPF38BQ5VTL8 546 aaKnown RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 DENND2CQ68D51 928 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 NOTUMQ6P988 496 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 RCOR2Q8IZ40 523 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 CCDC63Q8NA47 563 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 OR52K2Q8NGK3 314 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 STARD8Q92502 1023 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 ARL5BQ96KC2 179 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 SECISBP2Q96T21 854 aaKnown RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 PPANQ9NQ55 473 aaKnown RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 TBCCD1Q9NVR7 557 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 ANAPC5Q9UJX4 755 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 hCG_1818297A0A087WSY0 165 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 SMIM35A0A1B0GVV1 85 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 ANKRD34BA5PLL1 514 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 IDH3BO43837 385 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 BANF1O75531 89 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 SCGB1D2O95969 90 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 ATF2P15336 505 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 CREB1P16220 341 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 ADORA2BP29275 332 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 HOXC12P31275 282 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 L1CAMP32004 1257 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 ETV1P50549 477 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 CCR3P51677 355 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 PURAQ00577 322 aaKnown RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 CSTF3Q12996 717 aaKnown RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 C9orf57Q5W0N0 161 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 RGMBQ6NW40 437 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 SCYL2Q6P3W7 929 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 SHQ1Q6PI26 577 aaKnown RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 RHBDF2Q6PJF5 856 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 NPNTQ6UXI9 565 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 LRIG3Q6UXM1 1119 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 ALKAL1Q6UXT8 129 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 RXFP2Q8WXD0 754 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 RUNDC3BQ96NL0 473 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 AP5M1Q9H0R1 490 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 ADAM7Q9H2U9 754 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 GHITMQ9H3K2 345 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 SNX8Q9Y5X2 465 aa9.36□□□□□ -0.91
TCF4-224ENST00000564403 GPC6Q9Y625 555 aaPredicted RBP9.36□□□□□ -0.91
TCF4-224ENST00000564403 A8MXQ7 604 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 TRDMT1O14717 391 aaKnown RBP9.35□□□□□ -0.91
TCF4-224ENST00000564403 EIF3HO15372 352 aaKnown RBP eCLIP9.35□□□□□ -0.91
TCF4-224ENST00000564403 GAS8O95995 478 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 FYNP06241 537 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 RPS2P15880 293 aaKnown RBP9.35□□□□□ -0.91
TCF4-224ENST00000564403 PDGFRAP16234 1089 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 ACAT1P24752 427 aaKnown RBP9.35□□□□□ -0.91
TCF4-224ENST00000564403 HMOX2P30519 316 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 HADHAP40939 763 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 MAPKAPK2P49137 400 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 CDKN1CP49918 316 aaPredicted RBP9.35□□□□□ -0.91
TCF4-224ENST00000564403 ARSEP51690 589 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 INCA1Q0VD86 236 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 PTK6Q13882 451 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 SF3B4Q15427 424 aaKnown RBP eCLIP9.35□□□□□ -0.912e-6■■■■■ 28.8
TCF4-224ENST00000564403 CYTH1Q15438 398 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 KLHL38Q2WGJ6 581 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 TFDP3Q5H9I0 405 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 FAM47CQ5HY64 1035 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 IZUMO3Q5VZ72 239 aa9.35□□□□□ -0.91
TCF4-224ENST00000564403 METTL2BQ6P1Q9 378 aaKnown RBP9.35□□□□□ -0.91
TCF4-224ENST00000564403 ARHGAP11AQ6P4F7 1023 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms