RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.52■■□□□ 1.04
HERC2-204ENST00000563945 A0A1B0GVM2 712 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 TCAF2A6NFQ2 919 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 C1QTNF3-AMACRE9PGA6 284 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 RRP8O43159 456 aaKnown RBP21.52■■□□□ 1.04
HERC2-204ENST00000563945 FGFR1OPO95684 399 aaKnown RBP21.52■■□□□ 1.04
HERC2-204ENST00000563945 MAT2AP31153 395 aaKnown RBP21.52■■□□□ 1.04
HERC2-204ENST00000563945 CCR1P32246 355 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 USP8P40818 1118 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 RXRGP48443 463 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 SEMG2Q02383 582 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 OVGP1Q12889 678 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 TARDBPQ13148 414 aaKnown RBP eCLIP21.52■■□□□ 1.04
HERC2-204ENST00000563945 MTA1Q13330 715 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 ZNF177Q13360 481 aaPredicted RBP21.52■■□□□ 1.04
HERC2-204ENST00000563945 SHBQ15464 509 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 HS1BP3Q53T59 392 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 TTI2Q6NXR4 508 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 ENOSF1Q7L5Y1 443 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 CIR1Q86X95 450 aaPredicted RBP21.52■■□□□ 1.04
HERC2-204ENST00000563945 FAM81BQ96LP2 452 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 RPRD1AQ96P16 312 aaPredicted RBP21.52■■□□□ 1.04
HERC2-204ENST00000563945 DDIT4Q9NX09 232 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 CYTH4Q9UIA0 394 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 CNTN6Q9UQ52 1028 aa21.52■■□□□ 1.04
HERC2-204ENST00000563945 LATO43561 262 aa21.51■■□□□ 1.03
HERC2-204ENST00000563945 CKMT2P17540 419 aa21.51■■□□□ 1.03
HERC2-204ENST00000563945 PLK1P53350 603 aa21.51■■□□□ 1.03
HERC2-204ENST00000563945 PPP2CBP62714 309 aa21.51■■□□□ 1.03
HERC2-204ENST00000563945 PPP2CAP67775 309 aa21.51■■□□□ 1.03
HERC2-204ENST00000563945 ILKQ13418 452 aa21.51■■□□□ 1.03
HERC2-204ENST00000563945 EFHC1Q5JVL4 640 aa21.51■■□□□ 1.03
HERC2-204ENST00000563945 HES3Q5TGS1 186 aa21.51■■□□□ 1.03
HERC2-204ENST00000563945 IQCHQ86VS3 1027 aa21.51■■□□□ 1.03
HERC2-204ENST00000563945 TRIM59Q8IWR1 403 aa21.51■■□□□ 1.03
HERC2-204ENST00000563945 PIP4K2CQ8TBX8 421 aa21.51■■□□□ 1.03
HERC2-204ENST00000563945 CTNND2Q9UQB3 1225 aa21.51■■□□□ 1.03
HERC2-204ENST00000563945 BNIP3LO60238 219 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 RTN2O75298 545 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 VAV1P15498 845 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 DRD3P35462 400 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 ACADVLP49748 655 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 STX17P56962 302 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 SNX16P57768 344 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 CCDC15Q0P6D6 951 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 SETMARQ53H47 684 aaPredicted RBP21.5■■□□□ 1.03
HERC2-204ENST00000563945 FOXR2Q6PJQ5 311 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 CREBRFQ8IUR6 639 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 ELOA2Q8IYF1 753 aaPredicted RBP21.5■■□□□ 1.03
HERC2-204ENST00000563945 DEFB106AQ8N104 65 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 BAP1Q92560 729 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 NOX5Q96PH1 765 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 SRRTQ9BXP5 876 aaKnown RBP21.5■■□□□ 1.03
HERC2-204ENST00000563945 VPS28Q9UK41 221 aa21.5■■□□□ 1.03
HERC2-204ENST00000563945 COL5A1P20908 1838 aaPredicted RBP21.5■■□□□ 1.03
HERC2-204ENST00000563945 PPP1R3GB7ZBB8 358 aa21.49■■□□□ 1.03
HERC2-204ENST00000563945 PRAMEF26H0Y7S4 382 aa21.49■■□□□ 1.03
HERC2-204ENST00000563945 IGLV3-25P01717 112 aa21.49■■□□□ 1.03
HERC2-204ENST00000563945 GLI1P08151 1106 aa21.49■■□□□ 1.03
HERC2-204ENST00000563945 CLDN6P56747 220 aa21.49■■□□□ 1.03
HERC2-204ENST00000563945 PDCLQ13371 301 aa21.49■■□□□ 1.03
HERC2-204ENST00000563945 DLG2Q15700 870 aa21.49■■□□□ 1.03
HERC2-204ENST00000563945 FBXL22Q6P050 247 aa21.49■■□□□ 1.03
HERC2-204ENST00000563945 FRS2Q8WU20 508 aa21.49■■□□□ 1.03
HERC2-204ENST00000563945 KLHDC7BQ96G42 594 aa21.49■■□□□ 1.03
HERC2-204ENST00000563945 CCDC114Q96M63 670 aa21.49■■□□□ 1.03
HERC2-204ENST00000563945 NRSN2Q9GZP1 204 aa21.49■■□□□ 1.03
HERC2-204ENST00000563945 TP53BP1Q12888 1972 aaPredicted RBP21.48■■□□□ 1.03
HERC2-204ENST00000563945 BIN1O00499 593 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 ALOX15BO15296 676 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 PLRG1O43660 514 aaKnown RBP21.48■■□□□ 1.03
HERC2-204ENST00000563945 VASPP50552 380 aaPredicted RBP21.48■■□□□ 1.03
HERC2-204ENST00000563945 PITX1P78337 314 aaPredicted RBP21.48■■□□□ 1.03
HERC2-204ENST00000563945 CNTN1Q12860 1018 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 PAK1Q13153 545 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 NME3Q13232 169 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 TAF5Q15542 800 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 ARHGAP44Q17R89 818 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 POM121L1PQ3SYA9 428 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 OR6B2Q6IFH4 312 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 TRIM69Q86WT6 500 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 TSC1Q92574 1164 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 PPP1R13BQ96KQ4 1090 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 UBL7Q96S82 380 aaPredicted RBP21.48■■□□□ 1.03
HERC2-204ENST00000563945 PRMT1Q99873 361 aaKnown RBP21.48■■□□□ 1.03
HERC2-204ENST00000563945 FEM1AQ9BSK4 669 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 MUC3BQ9H195 1237 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 ASNSD1Q9NWL6 643 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 VANGL2Q9ULK5 521 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 LAMA5O15230 3695 aa21.48■■□□□ 1.03
HERC2-204ENST00000563945 MCF2LO15068 1137 aa21.47■■□□□ 1.03
HERC2-204ENST00000563945 ATP9BO43861 1147 aa21.47■■□□□ 1.03
HERC2-204ENST00000563945 HSF2BPO75031 334 aa21.47■■□□□ 1.03
HERC2-204ENST00000563945 GLDCP23378 1020 aa21.47■■□□□ 1.03
HERC2-204ENST00000563945 KRT83P78385 493 aa21.47■■□□□ 1.03
HERC2-204ENST00000563945 DAB2P98082 770 aa21.47■■□□□ 1.03
HERC2-204ENST00000563945 E2F1Q01094 437 aa21.47■■□□□ 1.03
HERC2-204ENST00000563945 AUHQ13825 339 aaKnown RBP21.47■■□□□ 1.03
HERC2-204ENST00000563945 FBXL19Q6PCT2 694 aa21.47■■□□□ 1.03
HERC2-204ENST00000563945 SPATS2Q86XZ4 545 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms