RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 TNFRSF4P43489 277 aa19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 COPS2P61201 443 aa19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 SEMA3BQ13214 749 aa19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 MANEALQ5VSG8 457 aa19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 RWDD4Q6NW29 188 aaKnown RBP19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 RFWD3Q6PCD5 774 aa19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 ANKS1BQ7Z6G8 1248 aa19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 ARFGAP1Q8N6T3 406 aa19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 FAM71BQ8TC56 605 aa19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 KCNF1Q9H3M0 494 aa19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 LZTFL1Q9NQ48 299 aa19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 TBC1D30Q9Y2I9 924 aa19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 EML5Q05BV3 1969 aa19.42■□□□□ 0.7
SYNGR3-203ENST00000563869 CFAP47Q6ZTR5 3102 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 CHD5Q8TDI0 1954 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 WASH4PA8MWX3 477 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 CREB3O43889 395 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 KIF5CO60282 957 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 TULP3O75386 442 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 RPP40O75818 363 aaKnown RBP19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 ZNF189O75820 626 aaPredicted RBP19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 LRIG2O94898 1065 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 ATP5BP06576 529 aaKnown RBP19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 ZFXP17010 805 aaPredicted RBP19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 OR1E1P30953 314 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 GEMIN4P57678 1058 aaKnown RBP19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 YBEYP58557 167 aaPredicted RBP19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 PPP6R3Q5H9R7 873 aaPredicted RBP19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 METTL3Q86U44 580 aaKnown RBP19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 KATNAL2Q8IYT4 538 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 RCOR2Q8IZ40 523 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 CCAR2Q8N163 923 aaKnown RBP19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 LRRC57Q8N9N7 239 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 HSPH1Q92598 858 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 ARHGEF4Q9NR80 690 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 KCND1Q9NSA2 647 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 RXFP3Q9NSD7 469 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 TMEM248Q9NWD8 314 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 XPO7Q9UIA9 1087 aaKnown RBP19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 CHD6Q8TD26 2715 aa19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 CNOT1A5YKK6 2376 aaKnown RBP19.41■□□□□ 0.7
SYNGR3-203ENST00000563869 GOLGA6L7A0A1B0GV03 622 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 ILVBLA1L0T0 632 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 SCAMP3O14828 347 aaKnown RBP19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 TSPAN3O60637 253 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 ATG13O75143 517 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 ZRANB2O95218 330 aaKnown RBP eCLIP19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 ASLP04424 464 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 CTNNA2P26232 953 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 CTNNA1P35221 906 aaKnown RBP19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 CDH6P55285 790 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 RPS24P62847 133 aaKnown RBP19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 CCDC6Q16204 474 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 TMEM196Q5HYL7 178 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 PLA2G2CQ5R387 149 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 STPG1Q5TH74 334 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 RFX8Q6ZV50 586 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 BZW1Q7L1Q6 419 aaKnown RBP19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 KBTBD6Q86V97 674 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 LRRC49Q8IUZ0 686 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 ZNF683Q8IZ20 524 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 CARNMT1Q8N4J0 409 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 TERB1Q8NA31 727 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 EXD1Q8NHP7 514 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 PRICKLE1Q96MT3 831 aaPredicted RBP19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 MAK16Q9BXY0 300 aaKnown RBP19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 HPCAL4Q9UM19 191 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 EFR3BQ9Y2G0 817 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 PCDHGA5Q9Y5G8 931 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 DUSP10Q9Y6W6 482 aa19.4■□□□□ 0.7
SYNGR3-203ENST00000563869 GRID2IPA4D2P6 1211 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 PALMO75781 387 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 KAT7O95251 611 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 PXNP49023 591 aaPredicted RBP19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 NDST2P52849 883 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 PLK1P53350 603 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 RWDD2BP57060 319 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 TFDP2Q14188 446 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 PARP15Q460N3 678 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 PKN3Q6P5Z2 889 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 RTL3Q8N8U3 475 aaKnown RBP19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 ACDQ96AP0 544 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 PEBP4Q96S96 227 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 C2orf49Q9BVC5 232 aaPredicted RBP19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 MAGEH1Q9H213 219 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 HAUS2Q9NVX0 235 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 SLC8A2Q9UPR5 921 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 PCDHA3Q9Y5H8 950 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 RAD54BQ9Y620 910 aa19.39■□□□□ 0.69
SYNGR3-203ENST00000563869 TBC1D3BA6NDS4 549 aa19.38■□□□□ 0.69
SYNGR3-203ENST00000563869 ZSCAN5CA6NGD5 496 aaPredicted RBP19.38■□□□□ 0.69
SYNGR3-203ENST00000563869 OTOL1A6NHN0 477 aaPredicted RBP19.38■□□□□ 0.69
SYNGR3-203ENST00000563869 RHOCP08134 193 aa19.38■□□□□ 0.69
SYNGR3-203ENST00000563869 PABPC1P11940 636 aaKnown RBP19.38■□□□□ 0.69
SYNGR3-203ENST00000563869 IL1R2P27930 398 aa19.38■□□□□ 0.69
SYNGR3-203ENST00000563869 NNMTP40261 264 aa19.38■□□□□ 0.69
SYNGR3-203ENST00000563869 OPRD1P41143 372 aa19.38■□□□□ 0.69
SYNGR3-203ENST00000563869 SMTNL2Q2TAL5 461 aa19.38■□□□□ 0.69
SYNGR3-203ENST00000563869 KCNT1Q5JUK3 1230 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms