RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 ARHGAP42A6NI28 874 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 SDR42E2A6NKP2 422 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 PEX11BO96011 259 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 DNAJB2P25686 324 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 PPM1AP35813 382 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 MSH2P43246 934 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 NDST2P52849 883 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 ACBD5Q5T8D3 534 aaPredicted RBP16.92■□□□□ 0.3
PKD1-225ENST00000562297 NUGGCQ68CJ6 796 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 TRMT10BQ6PF06 316 aaKnown RBP16.92■□□□□ 0.3
PKD1-225ENST00000562297 TFAP2DQ7Z6R9 452 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 LRRC49Q8IUZ0 686 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 GPR65Q8IYL9 337 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 TCEAL8Q8IYN2 117 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 STAMBPL1Q96FJ0 436 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 OXNAD1Q96HP4 312 aaPredicted RBP16.92■□□□□ 0.3
PKD1-225ENST00000562297 TRABDQ9H4I3 376 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 CCDC134Q9H6E4 229 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 MOCS1Q9NZB8 636 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 SENP1Q9P0U3 644 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 A0A1W2PPM1 405 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 CXorf49A8MYA2 514 aaPredicted RBP16.92■□□□□ 0.3
PKD1-225ENST00000562297 COCHO43405 550 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 KRT15P19012 456 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 MGAT1P26572 445 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 SESN2P58004 480 aaPredicted RBP16.92■□□□□ 0.3
PKD1-225ENST00000562297 OTOP3Q7RTS5 596 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 GSDMBQ8TAX9 411 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 CASS4Q9NQ75 786 aa16.92■□□□□ 0.3
PKD1-225ENST00000562297 GOLGA6L7A0A1B0GV03 622 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 TEX28O15482 410 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 USP12O75317 370 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 ALDH1A2O94788 518 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 ALDH1A3P47895 512 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 MTA1Q13330 715 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 C5orf22Q49AR2 442 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 HECTD3Q5T447 861 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 CYS1Q717R9 158 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 OR52K1Q8NGK4 314 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 USP33Q8TEY7 942 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 HMCESQ96FZ2 354 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 ZNF317Q96PQ6 595 aaPredicted RBP16.91■□□□□ 0.3
PKD1-225ENST00000562297 ZBP1Q9H171 429 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 MRPL17Q9NRX2 175 aaKnown RBP16.91■□□□□ 0.3
PKD1-225ENST00000562297 SYBUQ9NX95 663 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 IPO11Q9UI26 975 aaKnown RBP16.91■□□□□ 0.3
PKD1-225ENST00000562297 MYLKQ15746 1914 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 MIA3Q5JRA6 1907 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 GMNCA6NCL1 334 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 FAM159BA6NKW6 160 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 FGF18O76093 207 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 TWF1Q12792 350 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 FAM133BQ5BKY9 247 aaKnown RBP16.91■□□□□ 0.3
PKD1-225ENST00000562297 TIGD7Q6NT04 549 aaPredicted RBP16.91■□□□□ 0.3
PKD1-225ENST00000562297 TMEM150AQ86TG1 271 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 LRRC6Q86X45 466 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 FATE1Q969F0 183 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 CCT8L2Q96SF2 557 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 RXFP1Q9HBX9 757 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 KCNK9Q9NPC2 374 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 INSL5Q9Y5Q6 135 aa16.91■□□□□ 0.3
PKD1-225ENST00000562297 CHD9Q3L8U1 2897 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 PRRG1O14668 218 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 PRPF4O43172 522 aaKnown RBP eCLIP16.9■□□□□ 0.3
PKD1-225ENST00000562297 FAM107AO95990 144 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 OAS1P00973 400 aaKnown RBP16.9■□□□□ 0.3
PKD1-225ENST00000562297 TACR2P21452 398 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 SLC6A4P31645 630 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 IFNAR2P48551 515 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 SLC18A1P54219 525 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 PLD1Q13393 1074 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 SLC26A11Q86WA9 606 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 CHSY1Q86X52 802 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 CIR1Q86X95 450 aaPredicted RBP16.9■□□□□ 0.3
PKD1-225ENST00000562297 CLP1Q92989 425 aaKnown RBP16.9■□□□□ 0.3
PKD1-225ENST00000562297 RPRD1AQ96P16 312 aaPredicted RBP16.9■□□□□ 0.3
PKD1-225ENST00000562297 FCRL5Q96RD9 977 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 RNF38Q9H0F5 515 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 GLOD4Q9HC38 313 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.9■□□□□ 0.3
PKD1-225ENST00000562297 DONSONQ9NYP3 566 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 TRPM5Q9NZQ8 1165 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 CXXC1Q9P0U4 656 aaPredicted RBP16.9■□□□□ 0.3
PKD1-225ENST00000562297 PCDHB12Q9Y5F1 795 aa16.9■□□□□ 0.3
PKD1-225ENST00000562297 FAM47DPA6NHR8 397 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 TYROBPO43914 113 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 HLA-DQB2P05538 268 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 PGAM1P18669 254 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 CCT5P48643 541 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 LRRC14Q15048 493 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 DNAJB7Q7Z6W7 309 aaPredicted RBP16.89■□□□□ 0.29
PKD1-225ENST00000562297 CCNJLQ8IV13 435 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 UNC5BQ8IZJ1 945 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 C4orf33Q8N1A6 199 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 PPM1NQ8N819 430 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 DENND1AQ8TEH3 1009 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 NAT9Q9BTE0 207 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 ZNF180Q9UJW8 692 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 MAFFQ9ULX9 164 aa16.89■□□□□ 0.29
PKD1-225ENST00000562297 RRP15Q9Y3B9 282 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms