RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 MCM5P33992 734 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 CACNA2D1P54289 1103 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 PRKAA2P54646 552 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 SOX10P56693 466 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 TLE2Q04725 743 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 UBE3AQ05086 875 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 TRPC3Q13507 836 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 DNASE1L3Q13609 305 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 RALBP1Q15311 655 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 AAK1Q2M2I8 961 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 TMEM119Q4V9L6 283 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 C12orf76Q8N812 135 aaPredicted RBP4.15□□□□□ -1.75
HERC1-215ENST00000561436 USP38Q8NB14 1042 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 NAXEQ8NCW5 288 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 ADPRHL1Q8NDY3 354 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 SRFBP1Q8NEF9 429 aaKnown RBP4.15□□□□□ -1.75
HERC1-215ENST00000561436 OR1N1Q8NGS0 311 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 DAZAP1Q96EP5 407 aaKnown RBP4.15□□□□□ -1.75
HERC1-215ENST00000561436 COG8Q96MW5 612 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 PIGSQ96S52 555 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 TESK2Q96S53 571 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 RNF26Q9BY78 433 aaPredicted RBP4.15□□□□□ -1.75
HERC1-215ENST00000561436 CHODLQ9H9P2 273 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 KCNK9Q9NPC2 374 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 G6PC2Q9NQR9 355 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 SEMA4GQ9NTN9 838 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 DLL3Q9NYJ7 618 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 PDP2Q9P2J9 529 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 PI4KBQ9UBF8 816 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 GJD2Q9UKL4 321 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 DERAQ9Y315 318 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 CEP350Q5VT06 3117 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 PXDNLA1KZ92 1463 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 TOPAZ1Q8N9V7 1692 aa4.15□□□□□ -1.75
HERC1-215ENST00000561436 NCAPD2Q15021 1401 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 NHSQ6T4R5 1651 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 A0A0G2JLW4 131 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 SAC3D1A6NKF1 404 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 SLC38A8A6NNN8 435 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 H0YIZ8 118 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 NKX2-8O15522 239 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 CA12O43570 354 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 ALDOAP04075 364 aaKnown RBP4.14□□□□□ -1.75
HERC1-215ENST00000561436 DUSP1P28562 367 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 TM4SF1P30408 202 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 DIO1P49895 249 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 JAK3P52333 1124 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 VAMP2P63027 116 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 TLE3Q04726 772 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 GOLGA8FQ08AF8 430 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 LMAN2Q12907 356 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 FHL3Q13643 280 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 SMAD1Q15797 465 aaKnown RBP4.14□□□□□ -1.75
HERC1-215ENST00000561436 FAM187BQ17R55 369 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 CTXN3Q4LDR2 81 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 PLEKHO1Q53GL0 409 aaPredicted RBP4.14□□□□□ -1.75
HERC1-215ENST00000561436 CEP85Q6P2H3 762 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 ACSM6Q6P461 480 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 KIRREL2Q6UWL6 708 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 VSTM1Q6UX27 236 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 SERPINA13PQ6UXR4 307 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 SYT13Q7L8C5 426 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 ANKRD44Q8N8A2 993 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 DDB2Q92466 427 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 CTHRC1Q96CG8 243 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 EVI5LQ96CN4 794 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 ADGRE3Q9BY15 652 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 CIPCQ9C0C6 399 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 TWSG1Q9GZX9 223 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 UNC45AQ9H3U1 944 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 ZHX3Q9H4I2 956 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 SLC17A6Q9P2U8 582 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 MAFFQ9ULX9 164 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 PCDHB2Q9Y5E7 798 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 ITSN1Q15811 1721 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 SHANK3Q9BYB0 1731 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 KIAA1210Q9ULL0 1709 aa4.14□□□□□ -1.75
HERC1-215ENST00000561436 COL18A1P39060 1754 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 MEGF6O75095 1541 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 CCDC187A0A096LP49 1063 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 MANSC4A6NHS7 340 aaPredicted RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 UBE2Q2LH0YL09 131 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 GCATO75600 419 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 AGR2O95994 175 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 C1RP00736 705 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 PYGLP06737 847 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 HSPA1AP0DMV8 641 aaKnown RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 HSPA1BP0DMV9 641 aaKnown RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 ALADP13716 330 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 DRD4P21917 467 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 ITPKBP27987 946 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 SLC8A1P32418 973 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 CTCFP49711 727 aaPredicted RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 COPB1P53618 953 aaKnown RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 MAP2K1Q02750 393 aaPredicted RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 ITPK1Q13572 414 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 CNGA3Q16281 694 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 FAM110CQ1W6H9 321 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 GALNTL6Q49A17 601 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 GLE1Q53GS7 698 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms