RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 ATP1A4Q13733 1029 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 PTK2BQ14289 1009 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 TUBB8Q3ZCM7 444 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 TTC31Q49AM3 519 aaPredicted RBP4.48□□□□□ -1.69
LRRC28-222ENST00000561431 ATPAF1Q5TC12 328 aaPredicted RBP4.48□□□□□ -1.69
LRRC28-222ENST00000561431 DENND2CQ68D51 928 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 ABLIM2Q6H8Q1 611 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 KLHL10Q6JEL2 608 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 RINT1Q6NUQ1 792 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 DPY19L3Q6ZPD9 716 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 CCDC129Q6ZRS4 1044 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 PARS2Q7L3T8 475 aaKnown RBP4.48□□□□□ -1.69
LRRC28-222ENST00000561431 ZNF551Q7Z340 670 aaPredicted RBP4.48□□□□□ -1.69
LRRC28-222ENST00000561431 SNX32Q86XE0 403 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 C2CD5Q86YS7 1000 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 ZNF34Q8IZ26 560 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 NRSN1Q8IZ57 195 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 ZNF713Q8N859 430 aaPredicted RBP4.48□□□□□ -1.69
LRRC28-222ENST00000561431 NAXEQ8NCW5 288 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 ZNF384Q8TF68 577 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 WDR60Q8WVS4 1066 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 SOCS4Q8WXH5 440 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 ZDHHC12Q96GR4 267 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 NAF1Q96HR8 494 aaKnown RBP4.48□□□□□ -1.69
LRRC28-222ENST00000561431 GDF15Q99988 308 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 MAGEH1Q9H213 219 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 AGO4Q9HCK5 861 aaKnown RBP4.48□□□□□ -1.69
LRRC28-222ENST00000561431 SMYD2Q9NRG4 433 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 GRHPRQ9UBQ7 328 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 SEL1LQ9UBV2 794 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 CA14Q9ULX7 337 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 SH2B3Q9UQQ2 575 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 NIP7Q9Y221 180 aaKnown RBP eCLIP4.48□□□□□ -1.69
LRRC28-222ENST00000561431 DDX60Q8IY21 1712 aaKnown RBP4.48□□□□□ -1.69
LRRC28-222ENST00000561431 SLX4Q8IY92 1834 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 HMX3A6NHT5 357 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 H0YIN7 160 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 AGPSO00116 658 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 SYT5O00445 386 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 DNPH1O43598 174 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 PLOD3O60568 738 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 PPFIA2O75334 1257 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 ESRRBO95718 433 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 CCDC159P0C7I6 412 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 ARP10275 920 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 ZNF37AP17032 561 aaPredicted RBP4.47□□□□□ -1.69
LRRC28-222ENST00000561431 ENGP17813 658 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 EIF2S2P20042 333 aaKnown RBP4.47□□□□□ -1.69
LRRC28-222ENST00000561431 GPTP24298 496 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 SERPINF1P36955 418 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 SNX16P57768 344 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 TIAL1Q01085 375 aaKnown RBP eCLIP4.47□□□□□ -1.69
LRRC28-222ENST00000561431 MAP2K1Q02750 393 aaPredicted RBP4.47□□□□□ -1.69
LRRC28-222ENST00000561431 GALNT1Q10472 559 aaPredicted RBP4.47□□□□□ -1.69
LRRC28-222ENST00000561431 CSHL1Q14406 222 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 SMC1AQ14683 1233 aaKnown RBP4.47□□□□□ -1.69
LRRC28-222ENST00000561431 ST3GAL2Q16842 350 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 ERCC6LQ2NKX8 1250 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 TBC1D25Q3MII6 688 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 CRY2Q49AN0 593 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 HSP90B2PQ58FF3 399 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 INTS11Q5TA45 600 aaKnown RBP4.47□□□□□ -1.69
LRRC28-222ENST00000561431 ANKRD45Q5TZF3 282 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 SUSD4Q5VX71 490 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 PLBD1Q6P4A8 553 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 TLDC1Q6P9B6 456 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 CPLX2Q6PUV4 134 aaKnown RBP4.47□□□□□ -1.69
LRRC28-222ENST00000561431 KIF6Q6ZMV9 814 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 RFX8Q6ZV50 586 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 PEG10Q86TG7 708 aaKnown RBP4.47□□□□□ -1.69
LRRC28-222ENST00000561431 LDLRAD3Q86YD5 345 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 NGEFQ8N5V2 710 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 MIGA1Q8NAN2 632 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 C8orf58Q8NAV2 365 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 ABHD11Q8NFV4 315 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 TRAPPC12Q8WVT3 735 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 ZFPM2Q8WW38 1151 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 VOPP1Q96AW1 172 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 TBC1D31Q96DN5 1066 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 COQ10AQ96MF6 247 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 SPAG5Q96R06 1193 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 CRAMP1Q96RY5 1269 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 HAPLN3Q96S86 360 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 SORBS1Q9BX66 1292 aaKnown RBP4.47□□□□□ -1.69
LRRC28-222ENST00000561431 MRPL9Q9BYD2 267 aaKnown RBP4.47□□□□□ -1.69
LRRC28-222ENST00000561431 RANBP17Q9H2T7 1088 aaKnown RBP4.47□□□□□ -1.69
LRRC28-222ENST00000561431 RAI14Q9P0K7 980 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 RIMKLBQ9ULI2 386 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 AFG3L2Q9Y4W6 797 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 COL4A5P29400 1685 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 SBF1O95248 1867 aa4.47□□□□□ -1.69
LRRC28-222ENST00000561431 MAST3O60307 1309 aa4.46□□□□□ -1.69
LRRC28-222ENST00000561431 IL16Q14005 1332 aa4.46□□□□□ -1.69
LRRC28-222ENST00000561431 LRRC37AA6NMS7 1700 aa4.46□□□□□ -1.69
LRRC28-222ENST00000561431 DUOX1Q9NRD9 1551 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 ZAR1LA6NP61 321 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 VWC2LB2RUY7 222 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 CPLX1O14810 134 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 KIAA0355O15063 1070 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 PMPCBO75439 489 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms