RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 NR1D1P20393 614 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 CDC25CP30307 473 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 CORO1AP31146 461 aaKnown RBP17.51■□□□□ 0.39
HDDC3-206ENST00000561036 CD68P34810 354 aaPredicted RBP17.51■□□□□ 0.39
HDDC3-206ENST00000561036 CDH4P55283 916 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 GPX6P59796 221 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 SKOR1P84550 965 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 KLHL38Q2WGJ6 581 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 ADGRF1Q5T601 910 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 TTC39BQ5VTQ0 682 aaPredicted RBP17.51■□□□□ 0.39
HDDC3-206ENST00000561036 SPATA31D4Q6ZUB0 917 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 C3orf62Q6ZUJ4 267 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 ZNF534Q76KX8 674 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 TMC8Q8IU68 726 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 CCNJLQ8IV13 435 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 SH2D3CQ8N5H7 860 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 PDCD7Q8N8D1 485 aaKnown RBP17.51■□□□□ 0.39
HDDC3-206ENST00000561036 DEPDC1BQ8WUY9 529 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 MRPS31Q92665 395 aaKnown RBP17.51■□□□□ 0.39
HDDC3-206ENST00000561036 GCNAQ96QF7 691 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 WDR83Q9BRX9 315 aaKnown RBP17.51■□□□□ 0.39
HDDC3-206ENST00000561036 IPO11Q9UI26 975 aaKnown RBP17.51■□□□□ 0.39
HDDC3-206ENST00000561036 NOVA2Q9UNW9 492 aaKnown RBP17.51■□□□□ 0.39
HDDC3-206ENST00000561036 DOCK4Q8N1I0 1966 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 GOLGA6L7A0A1B0GV03 622 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 EXOC1LA0A1B0GW35 172 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 TRDMT1O14717 391 aaKnown RBP17.5■□□□□ 0.39
HDDC3-206ENST00000561036 RAMP2O60895 175 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 BANF1O75531 89 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 MBL2P11226 248 aaPredicted RBP17.5■□□□□ 0.39
HDDC3-206ENST00000561036 SLC6A4P31645 630 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 IRAK1P51617 712 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 TNK2Q07912 1038 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 HNRNPDQ14103 355 aaKnown RBP17.5■□□□□ 0.39
HDDC3-206ENST00000561036 LONRF1Q17RB8 773 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 PPM1LQ5SGD2 360 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 HP1BP3Q5SSJ5 553 aaPredicted RBP17.5■□□□□ 0.39
HDDC3-206ENST00000561036 PLPP4Q5VZY2 271 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 KCTD11Q693B1 232 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 CHST9Q7L1S5 443 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 TFAP2DQ7Z6R9 452 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 DENND1CQ8IV53 801 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 SIGLEC10Q96LC7 697 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 AGAP3Q96P47 875 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 FCRL5Q96RD9 977 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 EBNA1BP2Q99848 306 aaKnown RBP17.5■□□□□ 0.39
HDDC3-206ENST00000561036 C17orf80Q9BSJ5 609 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 NAT9Q9BTE0 207 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 CEP41Q9BYV8 373 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 ACSS3Q9H6R3 686 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 LRRC40Q9H9A6 602 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 RABGEF1Q9UJ41 708 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 CHMP2BQ9UQN3 213 aa17.5■□□□□ 0.39
HDDC3-206ENST00000561036 AAR2Q9Y312 384 aaKnown RBP17.5■□□□□ 0.39
HDDC3-206ENST00000561036 SDR42E2A6NKP2 422 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 SOBPA7XYQ1 873 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 HIDE1A8MVS5 230 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 AVILO75366 819 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 CLDN11O75508 207 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 ANXA9O76027 345 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 CPP00450 1065 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 KLKB1P03952 638 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 HDCP19113 662 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 NFKB1P19838 968 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 DNAJB1P25685 340 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 GABRR2P28476 465 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 HOXA9P31269 272 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 STX2P32856 288 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 RENBPP51606 427 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 CLCN4P51793 760 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 GYS2P54840 703 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 MAGOHP61326 146 aaKnown RBP17.49■□□□□ 0.39
HDDC3-206ENST00000561036 SLC7A9P82251 487 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 IL10RBQ08334 325 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 NR1H3Q13133 447 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 POLD3Q15054 466 aaPredicted RBP17.49■□□□□ 0.39
HDDC3-206ENST00000561036 SYCP2LQ5T4T6 812 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 ARHGAP36Q6ZRI8 547 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 CYS1Q717R9 158 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 IGDCC3Q8IVU1 814 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 CNTD1Q8N815 330 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 NSMCE1Q8WV22 266 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 HMCESQ96FZ2 354 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 ZFRQ96KR1 1074 aaKnown RBP17.49■□□□□ 0.39
HDDC3-206ENST00000561036 MAGEH1Q9H213 219 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 GLOD4Q9HC38 313 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 TRPC7Q9HCX4 862 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 GKN1Q9NS71 199 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 ZC3H7BQ9UGR2 993 aaKnown RBP17.49■□□□□ 0.39
HDDC3-206ENST00000561036 AGO1Q9UL18 857 aaKnown RBP17.49■□□□□ 0.39
HDDC3-206ENST00000561036 ZNF510Q9Y2H8 683 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 ANAPC1Q9H1A4 1944 aa17.49■□□□□ 0.39
HDDC3-206ENST00000561036 SMIM23A6NLE4 172 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 DDX6P26196 483 aaKnown RBP eCLIP17.48■□□□□ 0.39
HDDC3-206ENST00000561036 SSTR1P30872 391 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 OR1E1P30953 314 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 SLCO1A2P46721 670 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 EPHA5P54756 1037 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 GEMIN4P57678 1058 aaKnown RBP17.48■□□□□ 0.39
HDDC3-206ENST00000561036 SMAD3P84022 425 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms