RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 LGSNQ5TDP6 509 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 ANKRD22Q5VYY1 191 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 C9orf57Q5W0N0 161 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 UNC93AQ86WB7 457 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 NUDCD3Q8IVD9 361 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 LZTR1Q8N653 840 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 CPT1BQ92523 772 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 PALMDQ9NP74 551 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 PNPLA8Q9NP80 782 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 VPS45Q9NRW7 570 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 FAM49BQ9NUQ9 324 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 THAP1Q9NVV9 213 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 APPL1Q9UKG1 709 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 GJD2Q9UKL4 321 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 MCF2LO15068 1137 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 PRPSAP2O60256 369 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 GABBR2O75899 941 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 KRT37O76014 449 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 BAIAP3O94812 1187 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 C8BP07358 591 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 FUT4P22083 530 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 HMOX2P30519 316 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 ADAM17P78536 824 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 TUBB3Q13509 450 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 IRF5Q13568 498 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 GPR162Q16538 588 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 SOWAHAQ2M3V2 549 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 RALGPS1Q5JS13 557 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 FNBP1LQ5T0N5 605 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 ARHGAP17Q68EM7 881 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 TLK2Q86UE8 772 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 SLC26A11Q86WA9 606 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 TSPAN14Q8NG11 270 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 SPATA18Q8TC71 538 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 SLC35F5Q8WV83 523 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 KHSRPQ92945 711 aaKnown RBP eCLIP14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 WDR83Q9BRX9 315 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 CPA4Q9UI42 421 aa14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 PRPF19Q9UMS4 504 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 APOBEC2Q9Y235 224 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 FAM32AQ9Y421 112 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-220ENST00000560998 TRIP12Q14669 1992 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 GOLGA8MH3BSY2 632 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 BANF1O75531 89 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 CELF2O95319 508 aaKnown RBP14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 PROCP04070 461 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 RBP3P10745 1247 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 ITGAXP20702 1163 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 AXLP30530 894 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 SLC6A3Q01959 620 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 GAD2Q05329 585 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 MAP2K5Q13163 448 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 C16orf72Q14CZ0 275 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 NOMO1Q15155 1222 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 CDO1Q16878 200 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 FAM47CQ5HY64 1035 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 NPNTQ6UXI9 565 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 FAM71DQ8N9W8 422 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 OR6B3Q8NGW1 331 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 DNAJB3Q8WWF6 145 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 DLG3Q92796 817 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 SERPINI1Q99574 410 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 DNAJC28Q9NX36 388 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 FLRT1Q9NZU1 646 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 KIAA1522Q9P206 1035 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 UBQLN1Q9UMX0 589 aaKnown RBP14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 COQ6Q9Y2Z9 468 aa14.26□□□□□ -0.13
RABGGTA-220ENST00000560998 FUOMA2VDF0 154 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 HAS3O00219 553 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 PAPSS1O43252 624 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 SNRPAP09012 282 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 ZNF865P0CJ78 1059 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 THRAP10827 490 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 AKAP5P24588 427 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 PSEN2P49810 448 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 STX3Q13277 289 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 TFDP2Q14188 446 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 MSS51Q4VC12 460 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 DEFB107AQ8IZN7 70 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 TRIML2Q8N7C3 387 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 TMEM40Q8WWA1 233 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 USP6NLQ92738 828 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 CCDC124Q96CT7 223 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 RNF157Q96PX1 679 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 TSPAN18Q96SJ8 248 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 LPIN3Q9BQK8 851 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 APOL6Q9BWW8 343 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 DPEP3Q9H4B8 488 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 XAB2Q9HCS7 855 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 RNF19AQ9NV58 838 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 SCHIP1Q9P0W5 487 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 HESX1Q9UBX0 185 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 STK39Q9UEW8 545 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 RIMS3Q9UJD0 308 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 CDH7Q9ULB5 785 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 ARHGAP26Q9UNA1 814 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 SOBPA7XYQ1 873 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 PIRO00625 290 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 FBXO21O94952 628 aa14.25□□□□□ -0.13
RABGGTA-220ENST00000560998 BPGMP07738 259 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms