RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 PPFIA2O75334 1257 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 BANF1O75531 89 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 LATS1O95835 1130 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 JCHAINP01591 159 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 PSMB4P28070 264 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 CD68P34810 354 aaPredicted RBP22.86■■□□□ 1.25
SNX22-205ENST00000560945 CAV1Q03135 178 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 LRIT3Q3SXY7 679 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 LEKR1Q6ZMV7 388 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 PID1Q7Z2X4 250 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 LEMD2Q8NC56 503 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 AGAP3Q96P47 875 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 GORASP1Q9BQQ3 440 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 BRD8Q9H0E9 1235 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 ZNF576Q9H609 170 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 IPO11Q9UI26 975 aaKnown RBP22.86■■□□□ 1.25
SNX22-205ENST00000560945 LSM7Q9UK45 103 aaKnown RBP22.86■■□□□ 1.25
SNX22-205ENST00000560945 TRIOBPQ9H2D6 2365 aa22.86■■□□□ 1.25
SNX22-205ENST00000560945 RAMP2O60895 175 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 TBL1XO60907 577 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 PFKLP17858 780 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 CCNCP24863 283 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 DDX6P26196 483 aaKnown RBP eCLIP22.85■■□□□ 1.25
SNX22-205ENST00000560945 MAPKAPK2P49137 400 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 CDH4P55283 916 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 ELMSAN1Q6PJG2 1045 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 FAM217AQ8IXS0 508 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 MREGQ8N565 214 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 ZCCHC9Q8N567 271 aaKnown RBP22.85■■□□□ 1.25
SNX22-205ENST00000560945 CNTD1Q8N815 330 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 OR7D4Q8NG98 312 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 CDCA3Q99618 268 aaPredicted RBP22.85■■□□□ 1.25
SNX22-205ENST00000560945 FAM129AQ9BZQ8 928 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 NSUN3Q9H649 340 aaKnown RBP22.85■■□□□ 1.25
SNX22-205ENST00000560945 KLHL8Q9P2G9 620 aaPredicted RBP22.85■■□□□ 1.25
SNX22-205ENST00000560945 SHOC2Q9UQ13 582 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 PEX11BO96011 259 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 HSD17B3P37058 310 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 POLD3Q15054 466 aaPredicted RBP22.85■■□□□ 1.25
SNX22-205ENST00000560945 ZNF354CQ86Y25 554 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 EPB41L4BQ9H329 900 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 SEMA4AQ9H3S1 761 aa22.85■■□□□ 1.25
SNX22-205ENST00000560945 STK10O94804 968 aaKnown RBP22.84■■□□□ 1.25
SNX22-205ENST00000560945 MSS51Q4VC12 460 aa22.84■■□□□ 1.25
SNX22-205ENST00000560945 TEX44Q53QW1 395 aa22.84■■□□□ 1.25
SNX22-205ENST00000560945 HP1BP3Q5SSJ5 553 aaPredicted RBP22.84■■□□□ 1.25
SNX22-205ENST00000560945 FNBP1LQ5T0N5 605 aa22.84■■□□□ 1.25
SNX22-205ENST00000560945 PCGF5Q86SE9 256 aa22.84■■□□□ 1.25
SNX22-205ENST00000560945 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.84■■□□□ 1.25
SNX22-205ENST00000560945 ST13P5Q8NFI4 369 aaPredicted RBP22.84■■□□□ 1.25
SNX22-205ENST00000560945 WFDC5Q8TCV5 224 aa22.84■■□□□ 1.25
SNX22-205ENST00000560945 DDX50Q9BQ39 737 aaKnown RBP22.84■■□□□ 1.25
SNX22-205ENST00000560945 TDP1Q9NUW8 608 aa22.84■■□□□ 1.25
SNX22-205ENST00000560945 ACTL7AQ9Y615 435 aa22.84■■□□□ 1.25
SNX22-205ENST00000560945 REV3LO60673 3130 aa22.83■■□□□ 1.25
SNX22-205ENST00000560945 ARHGAP42A6NI28 874 aa22.83■■□□□ 1.25
SNX22-205ENST00000560945 ZNF197O14709 1029 aa22.83■■□□□ 1.25
SNX22-205ENST00000560945 MATN3O15232 486 aa22.83■■□□□ 1.25
SNX22-205ENST00000560945 OPHN1O60890 802 aa22.83■■□□□ 1.25
SNX22-205ENST00000560945 PAPLNO95428 1278 aa22.83■■□□□ 1.25
SNX22-205ENST00000560945 CCNB1P14635 433 aa22.83■■□□□ 1.25
SNX22-205ENST00000560945 PMS2P54278 862 aa22.83■■□□□ 1.25
SNX22-205ENST00000560945 FASTKD3Q14CZ7 662 aaKnown RBP22.83■■□□□ 1.25
SNX22-205ENST00000560945 FSCBQ5H9T9 825 aa22.83■■□□□ 1.25
SNX22-205ENST00000560945 CXorf57Q6NSI4 855 aaKnown RBP22.83■■□□□ 1.25
SNX22-205ENST00000560945 SYCE2Q6PIF2 218 aa22.83■■□□□ 1.25
SNX22-205ENST00000560945 TPGS1Q6ZTW0 290 aa22.83■■□□□ 1.25
SNX22-205ENST00000560945 ARID3BQ8IVW6 561 aaPredicted RBP22.83■■□□□ 1.25
SNX22-205ENST00000560945 UBLCP1Q8WVY7 318 aaPredicted RBP22.83■■□□□ 1.25
SNX22-205ENST00000560945 ARHGEF2Q92974 986 aaKnown RBP22.83■■□□□ 1.25
SNX22-205ENST00000560945 PLK2Q9NYY3 685 aa22.83■■□□□ 1.25
SNX22-205ENST00000560945 SHROOM3Q8TF72 1996 aa22.83■■□□□ 1.24
SNX22-205ENST00000560945 A0A1B0GVM2 712 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 TCAF2A6NFQ2 919 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 CHADO15335 359 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 CLDN11O75508 207 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 APRTP07741 180 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 NFKB1P19838 968 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 GRIA1P42261 906 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 SERINC3Q13530 473 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 SEMA5AQ13591 1074 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 PRPF38BQ5VTL8 546 aaKnown RBP22.82■■□□□ 1.24
SNX22-205ENST00000560945 CHST9Q7L1S5 443 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 OTOP3Q7RTS5 596 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 HOOK3Q86VS8 718 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 CARNMT1Q8N4J0 409 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 TDRD5Q8NAT2 981 aaKnown RBP22.82■■□□□ 1.24
SNX22-205ENST00000560945 TMA16Q96EY4 203 aaKnown RBP22.82■■□□□ 1.24
SNX22-205ENST00000560945 FERMT1Q9BQL6 677 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 HELZP42694 1942 aaKnown RBP22.82■■□□□ 1.24
SNX22-205ENST00000560945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.82■■□□□ 1.24
SNX22-205ENST00000560945 GLDCP23378 1020 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 IFI35P80217 286 aaPredicted RBP22.82■■□□□ 1.24
SNX22-205ENST00000560945 GNA12Q03113 381 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 ZNF33AQ06730 810 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 ZNF177Q13360 481 aaPredicted RBP22.82■■□□□ 1.24
SNX22-205ENST00000560945 OLIG2Q13516 323 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 ZNF77Q15935 545 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 PARP15Q460N3 678 aa22.82■■□□□ 1.24
SNX22-205ENST00000560945 TEKT5Q96M29 485 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms