RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ARNTLO00327 626 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 TSPAN3O60637 253 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 ASGR2P07307 311 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 ARSAP15289 507 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 GDI1P31150 447 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 HOXC13P31276 330 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 IRAK1P51617 712 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 TRIP13Q15645 432 aaPredicted RBP16.98■□□□□ 0.31
TPM1-219ENST00000559397 GSTA5Q7RTV2 222 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 TMC3Q7Z5M5 1100 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 TMEM25Q86YD3 366 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 SLC44A3Q8N4M1 653 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 GLIS1Q8NBF1 620 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 IRF7Q92985 503 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 TMEM121Q9BTD3 319 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 EBF3Q9H4W6 596 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 SPHK2Q9NRA0 654 aa16.98■□□□□ 0.31
TPM1-219ENST00000559397 H3BRJ5 948 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 CREB3O43889 395 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 PPFIA2O75334 1257 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 RBP3P10745 1247 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 GOT1P17174 413 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 ADCY8P40145 1251 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 ARL4AP40617 200 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 NR2C2P49116 596 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 ZNF135P52742 658 aaPredicted RBP16.97■□□□□ 0.31
TPM1-219ENST00000559397 CAV1Q03135 178 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 CALCOCO2Q13137 446 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 DHCR24Q15392 516 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 FYB2Q5VWT5 728 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 ALS2CLQ60I27 953 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 C1orf228Q6PIY5 440 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 LRRC31Q6UY01 552 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 IQCKQ8N0W5 287 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 BBOF1Q8ND07 529 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 ATP2A3Q93084 1043 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 EPAS1Q99814 870 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 ACBD3Q9H3P7 528 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 MARK1Q9P0L2 795 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 MTRF1LQ9UGC7 380 aaKnown RBP16.97■□□□□ 0.31
TPM1-219ENST00000559397 TCF20Q9UGU0 1960 aaKnown RBP16.97■□□□□ 0.31
TPM1-219ENST00000559397 OTOL1A6NHN0 477 aaPredicted RBP16.97■□□□□ 0.31
TPM1-219ENST00000559397 NFATC1O95644 943 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 CYP17A1P05093 508 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 HTR7P34969 479 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 HCAR3P49019 387 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 RPS24P62847 133 aaKnown RBP16.97■□□□□ 0.31
TPM1-219ENST00000559397 TNK2Q07912 1038 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 DPYSQ14117 519 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 MPPE1Q53F39 396 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 SPDYCQ5MJ68 293 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 LY6G5CQ5SRR4 150 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 RNF43Q68DV7 783 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 TPGS1Q6ZTW0 290 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 PRUNE1Q86TP1 453 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 CFAP52Q8N1V2 620 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 TBC1D31Q96DN5 1066 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 TMA16Q96EY4 203 aaKnown RBP16.97■□□□□ 0.31
TPM1-219ENST00000559397 RPRD1AQ96P16 312 aaPredicted RBP16.97■□□□□ 0.31
TPM1-219ENST00000559397 ECT2Q9H8V3 914 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 ARHGEF4Q9NR80 690 aa16.97■□□□□ 0.31
TPM1-219ENST00000559397 COL4A3Q01955 1670 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 AGPSO00116 658 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 SGK1O00141 431 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 EEF2KO00418 725 aaKnown RBP16.96■□□□□ 0.31
TPM1-219ENST00000559397 CNTN5O94779 1100 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 ZSCAN5DPP0CG00 497 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 ETS1P14921 441 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 AMPD1P23109 780 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 STIP1P31948 543 aaKnown RBP16.96■□□□□ 0.31
TPM1-219ENST00000559397 ITGA8P53708 1063 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 TPI1P60174 286 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 XRCC4Q13426 336 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 UAP1Q16222 522 aaPredicted RBP16.96■□□□□ 0.31
TPM1-219ENST00000559397 ALFQ53S48 1182 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 RABGAP1LQ5R372 815 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 MPP7Q5T2T1 576 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 NCBP2-AS2Q69YL0 99 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 RFX8Q6ZV50 586 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 CIR1Q86X95 450 aaPredicted RBP16.96■□□□□ 0.31
TPM1-219ENST00000559397 KRT222Q8N1A0 295 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 ZYG11BQ9C0D3 744 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 USP29Q9HBJ7 922 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 MPP6Q9NZW5 540 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 ZNF212Q9UDV6 495 aa16.96■□□□□ 0.31
TPM1-219ENST00000559397 BCLAF3A2AJT9 711 aaKnown RBP16.95■□□□□ 0.3
TPM1-219ENST00000559397 DNALI1O14645 258 aaPredicted RBP16.95■□□□□ 0.3
TPM1-219ENST00000559397 PENKP01210 267 aaPredicted RBP16.95■□□□□ 0.3
TPM1-219ENST00000559397 COL4A2P08572 1712 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 VCANP13611 3396 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 HOXD9P28356 352 aaPredicted RBP16.95■□□□□ 0.3
TPM1-219ENST00000559397 EPHB2P29323 1055 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 HSD17B3P37058 310 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 VPS41P49754 854 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 GDF10P55107 478 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 GBE1Q04446 702 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 DHX9Q08211 1270 aaKnown RBP16.95■□□□□ 0.3
TPM1-219ENST00000559397 SLC10A2Q12908 348 aaPredicted RBP16.95■□□□□ 0.3
TPM1-219ENST00000559397 RUNX3Q13761 415 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 GAB4Q2WGN9 574 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms