RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 ZNF846Q147U1 533 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 FAM98CQ17RN3 349 aaKnown RBP11.43□□□□□ -0.58
PCAT29-201ENST00000558411 ARL13BQ3SXY8 428 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 MFSD4BQ5TF39 518 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 CDC42EP5Q6NZY7 148 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 SLC51AQ86UW1 340 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 CCDC24Q8N4L8 307 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 JOSD2Q8TAC2 188 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 ZSCAN18Q8TBC5 510 aaPredicted RBP11.43□□□□□ -0.58
PCAT29-201ENST00000558411 ALPK1Q96QP1 1244 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 CGRRF1Q99675 332 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 UNC93B1Q9H1C4 597 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 GPN2Q9H9Y4 310 aaPredicted RBP11.43□□□□□ -0.58
PCAT29-201ENST00000558411 POLR1BQ9H9Y6 1135 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 MAGEE1Q9HCI5 957 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 VTA1Q9NP79 307 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 ARMC1Q9NVT9 282 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 DAPK2Q9UIK4 370 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 MID2Q9UJV3 735 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 ADAM28Q9UKQ2 775 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 SARDHQ9UL12 918 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 CNOT6Q9ULM6 557 aaKnown RBP11.43□□□□□ -0.58
PCAT29-201ENST00000558411 STYXL1Q9Y6J8 313 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 PTPRJQ12913 1337 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 TCAF2A6NFQ2 919 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 TRIM24O15164 1050 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 TRIM13O60858 407 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 CPNE6O95741 557 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 MLNP12872 115 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 MAP4P27816 1152 aaKnown RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 TYK2P29597 1187 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 ATXN3P54252 364 aaPredicted RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 ARPC4P59998 168 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 PSME3P61289 254 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 ATP6V0D1P61421 351 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 YWHAEP62258 255 aaKnown RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 PRAMEP78395 509 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 PRKCQQ04759 706 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 TRAF2Q12933 501 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 CAMK2BQ13554 666 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 TUBA3CQ13748 450 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 PDK2Q15119 407 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 SLC36A3Q495N2 470 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 TMEM214Q6NUQ4 689 aaKnown RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 GALNT18Q6P9A2 607 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 LINC00299Q6ZSB3 139 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 ZFPM1Q8IX07 1006 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 MPP5Q8N3R9 675 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 OR13F1Q8NGS4 319 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 SLC7A14Q8TBB6 771 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 BSNDQ8WZ55 320 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 RNF157Q96PX1 679 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 ADI1Q9BV57 179 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 DEFB129Q9H1M3 183 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 LHX5Q9H2C1 402 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 NOL11Q9H8H0 719 aaKnown RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 AGO4Q9HCK5 861 aaKnown RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 C20orf96Q9NUD7 363 aaPredicted RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 SMOXQ9NWM0 555 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 ADA2Q9NZK5 511 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 NXF1Q9UBU9 619 aaKnown RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 USP18Q9UMW8 372 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 PCDHGA7Q9Y5G6 932 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 HEATR9A2RTY3 570 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 G3V2L1 256 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 SOCS2O14508 198 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 DGKIO75912 1065 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 RSL1D1O76021 490 aaKnown RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 TOMM70O94826 608 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 JUNBP17275 347 aaPredicted RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 FGFR3P22607 806 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 RBL1P28749 1068 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 TKTP29401 623 aaKnown RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 RPL14P50914 215 aaKnown RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 CD300CQ08708 224 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 MERTKQ12866 999 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 VPS72Q15906 364 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 PPP6R3Q5H9R7 873 aaPredicted RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 SLC9A4Q6AI14 798 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 HHIPL2Q6UWX4 724 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 ABRAXAS1Q6UWZ7 409 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 NAPRTQ6XQN6 538 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 ERMP1Q7Z2K6 904 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 MCF2L2Q86YR7 1114 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 SLC7A5P1Q8MH63 180 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 RAB2BQ8WUD1 216 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 TMA16Q96EY4 203 aaKnown RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 FEM1CQ96JP0 617 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 IMPG2Q9BZV3 1241 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 WDR55Q9H6Y2 383 aaPredicted RBP11.42□□□□□ -0.58
PCAT29-201ENST00000558411 NANOGQ9H9S0 305 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 GPRC5DQ9NZD1 345 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 PI4KBQ9UBF8 816 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 PCSK1NQ9UHG2 260 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 CDYLQ9Y232 598 aa11.42□□□□□ -0.58
PCAT29-201ENST00000558411 ZNF839A8K0R7 811 aa11.41□□□□□ -0.58
PCAT29-201ENST00000558411 DLGAP1O14490 977 aa11.41□□□□□ -0.58
PCAT29-201ENST00000558411 ZNF182P17025 639 aaPredicted RBP11.41□□□□□ -0.58
PCAT29-201ENST00000558411 LIG4P49917 911 aa11.41□□□□□ -0.58
PCAT29-201ENST00000558411 JAK3P52333 1124 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms