RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 RASA4O43374 803 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 RAMP2O60895 175 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 NEBLO76041 1014 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 CNTN5O94779 1100 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 SUN1O94901 812 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 AP2A1O95782 977 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 CORO1AP31146 461 aaKnown RBP12.76□□□□□ -0.37
SHMT2-233ENST00000557529 MMP13P45452 471 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 SLCO1A2P46721 670 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 IRAK1P51617 712 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 GYS2P54840 703 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 GPX6P59796 221 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 MAGOHP61326 146 aaKnown RBP12.76□□□□□ -0.37
SHMT2-233ENST00000557529 RASA2Q15283 850 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 FAM133BQ5BKY9 247 aaKnown RBP12.76□□□□□ -0.37
SHMT2-233ENST00000557529 PPM1LQ5SGD2 360 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 SYCP2LQ5T4T6 812 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 ADGRF1Q5T601 910 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 TTC39BQ5VTQ0 682 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-233ENST00000557529 PDE12Q6L8Q7 609 aaKnown RBP12.76□□□□□ -0.37
SHMT2-233ENST00000557529 KDM7AQ6ZMT4 941 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 ARHGAP36Q6ZRI8 547 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 C3orf62Q6ZUJ4 267 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 ZNF534Q76KX8 674 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 TDRPQ86YL5 185 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 CCNJLQ8IV13 435 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 DENND1CQ8IV53 801 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 ZSCAN18Q8TBC5 510 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-233ENST00000557529 MICAL1Q8TDZ2 1067 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 NSMCE1Q8WV22 266 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 MAML1Q92585 1016 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 AGAP3Q96P47 875 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 WDR83Q9BRX9 315 aaKnown RBP12.76□□□□□ -0.37
SHMT2-233ENST00000557529 C17orf80Q9BSJ5 609 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 ACSS3Q9H6R3 686 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 NOL6Q9H6R4 1146 aaKnown RBP12.76□□□□□ -0.37
SHMT2-233ENST00000557529 ZNF212Q9UDV6 495 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 ZC3H7BQ9UGR2 993 aaKnown RBP12.76□□□□□ -0.37
SHMT2-233ENST00000557529 LGALS13Q9UHV8 139 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 SLC24A2Q9UI40 661 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 SDR42E2A6NKP2 422 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 HIDE1A8MVS5 230 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 CACNG3O60359 315 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 AVILO75366 819 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 CLDN11O75508 207 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 ANXA9O76027 345 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 KLKB1P03952 638 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 HDCP19113 662 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 NFKB1P19838 968 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 GABRR2P28476 465 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 OR1E1P30953 314 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 SLC6A4P31645 630 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 STX2P32856 288 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 CD68P34810 354 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-233ENST00000557529 IFNAR2P48551 515 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 RENBPP51606 427 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 CDH4P55283 916 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 SMAD3P84022 425 aaKnown RBP12.75□□□□□ -0.37
SHMT2-233ENST00000557529 SKOR1P84550 965 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 NR1H3Q13133 447 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 HNRNPDQ14103 355 aaKnown RBP12.75□□□□□ -0.37
SHMT2-233ENST00000557529 POLD3Q15054 466 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-233ENST00000557529 TNFAIP8L3Q5GJ75 292 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 CHST9Q7L1S5 443 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 TAOK1Q7L7X3 1001 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 TMC8Q8IU68 726 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 KLHDC8BQ8IXV7 354 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 HMCESQ96FZ2 354 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 SIGLEC10Q96LC7 697 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 FCRL5Q96RD9 977 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 CYTH2Q99418 400 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 EBNA1BP2Q99848 306 aaKnown RBP12.75□□□□□ -0.37
SHMT2-233ENST00000557529 NAT9Q9BTE0 207 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 LRRC3Q9BY71 257 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 LRRC40Q9H9A6 602 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 SP110Q9HB58 689 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 GLOD4Q9HC38 313 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 ASAH2Q9NR71 780 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 GKN1Q9NS71 199 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 PSD3Q9NYI0 1048 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 STOML2Q9UJZ1 356 aa12.75□□□□□ -0.37
SHMT2-233ENST00000557529 AGO1Q9UL18 857 aaKnown RBP12.75□□□□□ -0.37
SHMT2-233ENST00000557529 AAR2Q9Y312 384 aaKnown RBP12.75□□□□□ -0.37
SHMT2-233ENST00000557529 PLXNA4Q9HCM2 1894 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 F5H423 210 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-233ENST00000557529 TRDMT1O14717 391 aaKnown RBP12.74□□□□□ -0.37
SHMT2-233ENST00000557529 IRF1P10914 325 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 DNAJB1P25685 340 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 SSTR1P30872 391 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 HOXA9P31269 272 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 CLCN4P51793 760 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 GEMIN4P57678 1058 aaKnown RBP12.74□□□□□ -0.37
SHMT2-233ENST00000557529 PPP2R2AP63151 447 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 SLC7A9P82251 487 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 IL10RBQ08334 325 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 TERF2Q15554 542 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 SKIDA1Q1XH10 827 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 FAM182AQ5T1J6 154 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 KCTD11Q693B1 232 aa12.74□□□□□ -0.37
SHMT2-233ENST00000557529 TXNDC8Q6A555 127 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms