RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 CYP46A1Q9Y6A2 500 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 WNT6Q9Y6F9 365 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 FLNBO75369 2602 aaKnown RBP5.18□□□□□ -1.58
ATXN3-247ENST00000557311 ZZEF1O43149 2961 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 STK36Q9NRP7 1315 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 TRAV19A0A0A6YYK7 116 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 ZC3H12DA2A288 527 aaKnown RBP5.17□□□□□ -1.58
ATXN3-247ENST00000557311 TRABD2BA6NFA1 517 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 CAPN8A6NHC0 703 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 LACTBL1A8MY62 500 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 BTBD18B2RXH4 712 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 SGK1O00141 431 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 PIRO00625 290 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 CDC45O75419 566 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 GJB3O75712 270 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 REC8O95072 547 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 KLF8O95600 359 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-247ENST00000557311 FUCA1P04066 466 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 KRT1P04264 644 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 CKMP06732 381 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 ADRB2P07550 413 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 PLA2G2AP14555 144 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 HNRNPLP14866 589 aaKnown RBP eCLIP5.17□□□□□ -1.58
ATXN3-247ENST00000557311 GNSP15586 552 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 HDCP19113 662 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 GLDCP23378 1020 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 CCT6AP40227 531 aaKnown RBP5.17□□□□□ -1.58
ATXN3-247ENST00000557311 OPRD1P41143 372 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 GRIA2P42262 883 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 TNFRSF4P43489 277 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 RPL10AP62906 217 aaKnown RBP5.17□□□□□ -1.58
ATXN3-247ENST00000557311 ZNF33AQ06730 810 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 MCL1Q07820 350 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 CYP4F3Q08477 520 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 NOLC1Q14978 699 aaKnown RBP eCLIP5.17□□□□□ -1.58
ATXN3-247ENST00000557311 NR1I3Q14994 352 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 TERF2Q15554 542 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 ZNF77Q15935 545 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 NFE2Q16621 373 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-247ENST00000557311 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 SPATA1Q5VX52 437 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 HAUS3Q68CZ6 603 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 PAQR3Q6TCH7 311 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 RPTNQ6XPR3 784 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 LRRTM3Q86VH5 581 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 NAXDQ8IW45 347 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 CD302Q8IX05 232 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 ADGRG2Q8IZP9 1017 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 ALLCQ8N6M5 410 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 KIAA1958Q8N8K9 716 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 FSIP1Q8NA03 581 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 IL17RCQ8NAC3 791 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 SH3RF2Q8TEC5 729 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 LRRC15Q8TF66 581 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 HMGB4Q8WW32 186 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 PNKPQ96T60 521 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 ZDHHC5Q9C0B5 715 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 TMEM60Q9H2L4 133 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 FSCN3Q9NQT6 498 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 MAGED2Q9UNF1 606 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-247ENST00000557311 DNM3Q9UQ16 869 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 RAI2Q9Y5P3 530 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 COL4A2P08572 1712 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 GREB1Q4ZG55 1949 aa5.17□□□□□ -1.58
ATXN3-247ENST00000557311 RALGAPA1Q6GYQ0 2036 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TCRBV21S2A2A0A5A6 115 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 E9PAM4 449 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 CYB561D2O14569 222 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 SLC9A3R1O14745 358 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 CAPN9O14815 690 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 SLC16A4O15374 487 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TBX1O43435 398 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 PFKFB2O60825 505 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 CBFA2T3O75081 653 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 HIP1RO75146 1068 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 ZNF217O75362 1048 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 NOL4O94818 638 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 KAT7O95251 611 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 PRB1P04280 392 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 CYBBP04839 570 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 APODP05090 189 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 THBDP07204 575 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TPM1P09493 284 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 CXCL8P10145 99 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 PFKLP17858 780 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 MCM7P33993 719 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 EIF2DP41214 584 aaKnown RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 MATR3P43243 847 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 ABCG1P45844 678 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 SLC6A11P48066 632 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 PDE6CP51160 858 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 GUCY2FP51841 1108 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 CDR1P51861 262 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 NCKAP1LP55160 1127 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 TSPY1Q01534 308 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 ORC2Q13416 577 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 PDIA5Q14554 519 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 RBBP5Q15291 538 aaKnown RBP5.16□□□□□ -1.58
ATXN3-247ENST00000557311 DDR2Q16832 855 aa5.16□□□□□ -1.58
ATXN3-247ENST00000557311 PLEKHG6Q3KR16 790 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms