RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SHOX2O60902 331 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 IDH1O75874 414 aaKnown RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 ZBED1O96006 694 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 HRGP04196 525 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 THP07101 528 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 NR2F6P10588 404 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 PCP11498 1178 aaKnown RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 SLC5A1P13866 664 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 EEF1GP26641 437 aaKnown RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 HOXA7P31268 230 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 PPP1R2P41236 205 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 GTF2A1P52655 376 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 SUMO3P55854 103 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 SP2Q02086 613 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 PPFIA1Q13136 1202 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 MTF1Q14872 753 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 KRT31Q15323 416 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 KIAA0753Q2KHM9 967 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 HSP90AA4PQ58FG1 418 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 SPECC1Q5M775 1068 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 SYCP2LQ5T4T6 812 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 RNF220Q5VTB9 566 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 PAPD7Q5XG87 772 aaKnown RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 PTF1AQ7RTS3 328 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 TRAPPC11Q7Z392 1133 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 ZNF280BQ86YH2 543 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 CCDC170Q8IYT3 715 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 SPATA5Q8NB90 893 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 FANCBQ8NB91 859 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 FAM76AQ8TAV0 307 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 KBTBD7Q8WVZ9 684 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 CCDC47Q96A33 483 aaKnown RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 TTC17Q96AE7 1141 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 FKBP10Q96AY3 582 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 MOGAT1Q96PD6 335 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 EIF3CQ99613 913 aaKnown RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 UBAC1Q9BSL1 405 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 NUP58Q9BVL2 599 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 MS4A7Q9GZW8 240 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 THAP9Q9H5L6 903 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 ADARB2Q9NS39 739 aaKnown RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 DKK3Q9UBP4 350 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 HPCAL4Q9UM19 191 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 FAM50BQ9Y247 325 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 MRPS17Q9Y2R5 130 aaKnown RBP5.07□□□□□ -1.6
ATXN3-246ENST00000557030 SAR1BQ9Y6B6 198 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 ZNF831Q5JPB2 1677 aa5.07□□□□□ -1.6
ATXN3-246ENST00000557030 ATXN2Q99700 1313 aaKnown RBP5.06□□□□□ -1.6
ATXN3-246ENST00000557030 LGALS16A8MUM7 142 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 VGLL3A8MV65 326 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 KCNJ18B7U540 433 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 PRKAB2O43741 272 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 ORC4O43929 436 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 MBD4O95243 580 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 EN2P19622 333 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-246ENST00000557030 RXRAP19793 462 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 KRT9P35527 623 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 LONP1P36776 959 aaKnown RBP5.06□□□□□ -1.6
ATXN3-246ENST00000557030 VIPR2P41587 438 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 ARHGAP25P42331 645 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 TDO2P48775 406 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 NT5C2P49902 561 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 ARFIP2P53365 341 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 IRX3P78415 501 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-246ENST00000557030 KRT17Q04695 432 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 CHRNDQ07001 517 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 KCNJ12Q14500 433 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 TBCCQ15814 346 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 MEA1Q16626 185 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 CCDC152Q4G0S7 254 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 TCP11X2Q5H9J9 407 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 SLC10A5Q5PT55 438 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 ZNF658Q5TYW1 1059 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-246ENST00000557030 RRAGBQ5VZM2 374 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 ARL6IP4Q66PJ3 421 aaKnown RBP5.06□□□□□ -1.6
ATXN3-246ENST00000557030 KLHL10Q6JEL2 608 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 RGS7BPQ6MZT1 257 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-246ENST00000557030 LRRC31Q6UY01 552 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 ZNF788Q6ZQV5 615 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 SMIM5Q71RC9 77 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 KIAA1328Q86T90 577 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 TADA2BQ86TJ2 420 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 FAM114A1Q8IWE2 563 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 SUGP1Q8IWZ8 645 aaKnown RBP5.06□□□□□ -1.6
ATXN3-246ENST00000557030 ACRBPQ8NEB7 543 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 ZNF384Q8TF68 577 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 LRTOMTQ8WZ04 291 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 ESR2Q92731 530 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 BHMT2Q9H2M3 363 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 MAGEF1Q9HAY2 307 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 SERTAD4Q9NUC0 356 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 STK32BQ9NY57 414 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 LCMT1Q9UIC8 334 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 NDRG4Q9ULP0 352 aaKnown RBP5.06□□□□□ -1.6
ATXN3-246ENST00000557030 CAPN11Q9UMQ6 739 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 KCNJ14Q9UNX9 436 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 SHOC2Q9UQ13 582 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 NIP7Q9Y221 180 aaKnown RBP eCLIP5.06□□□□□ -1.6
ATXN3-246ENST00000557030 TBC1D30Q9Y2I9 924 aa5.06□□□□□ -1.6
ATXN3-246ENST00000557030 PCDHGB6Q9Y5F9 930 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms