RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 AZIN2Q96A70 460 aa6.53□□□□□ -1.36
LGMN-213ENST00000556790 PCMTD1Q96MG8 357 aaPredicted RBP6.53□□□□□ -1.36
LGMN-213ENST00000556790 NUP58Q9BVL2 599 aa6.53□□□□□ -1.36
LGMN-213ENST00000556790 RSPH9Q9H1X1 276 aaPredicted RBP6.53□□□□□ -1.36
LGMN-213ENST00000556790 PABPC3Q9H361 631 aaKnown RBP6.53□□□□□ -1.36
LGMN-213ENST00000556790 GAREM1Q9H706 876 aa6.53□□□□□ -1.36
LGMN-213ENST00000556790 FZD3Q9NPG1 666 aa6.53□□□□□ -1.36
LGMN-213ENST00000556790 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.53□□□□□ -1.36
LGMN-213ENST00000556790 TAS2R14Q9NYV8 317 aa6.53□□□□□ -1.36
LGMN-213ENST00000556790 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.53□□□□□ -1.36
LGMN-213ENST00000556790 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.53□□□□□ -1.36
LGMN-213ENST00000556790 OR51B4Q9Y5P0 310 aa6.53□□□□□ -1.36
LGMN-213ENST00000556790 TDRD6O60522 2096 aaKnown RBP6.53□□□□□ -1.36
LGMN-213ENST00000556790 CABIN1Q9Y6J0 2220 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 PTPRBP23467 1997 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 A0A1B0GTW7 788 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 TYW5A2RUC4 315 aaKnown RBP6.52□□□□□ -1.37
LGMN-213ENST00000556790 TMCO5BA8MYB1 307 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 E9PAM4 449 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 H0Y8X5 98 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 BCAT2O15382 392 aaPredicted RBP6.52□□□□□ -1.37
LGMN-213ENST00000556790 SART1O43290 800 aaKnown RBP6.52□□□□□ -1.37
LGMN-213ENST00000556790 TIMM44O43615 452 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 IGLV3-19P01714 112 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 SRCP12931 536 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 CCR1P32246 355 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 ACVRL1P37023 503 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 MATKP42679 507 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 CXCR3P49682 368 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 JAM2P57087 298 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 ST8SIA6P61647 398 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 PTP4A2Q12974 167 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 DLG2Q15700 870 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 CCDC14Q49A88 953 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 ANO6Q4KMQ2 910 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 LRRC73Q5JTD7 316 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 WDR45BQ5MNZ6 344 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 FAM182AQ5T1J6 154 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 MPP7Q5T2T1 576 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 SYCP2LQ5T4T6 812 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 E4F1Q66K89 784 aaPredicted RBP6.52□□□□□ -1.37
LGMN-213ENST00000556790 SASS6Q6UVJ0 657 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 CLEC17AQ6ZS10 378 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 RBM43Q6ZSC3 357 aaKnown RBP6.52□□□□□ -1.37
LGMN-213ENST00000556790 METTL3Q86U44 580 aaKnown RBP6.52□□□□□ -1.37
LGMN-213ENST00000556790 NAXDQ8IW45 347 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 DRC7Q8IY82 874 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 TMEM35BQ8NCS4 154 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 OR6K2Q8NGY2 324 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 OR14C36Q8NHC7 312 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 SETD7Q8WTS6 366 aaKnown RBP6.52□□□□□ -1.37
LGMN-213ENST00000556790 RXFP2Q8WXD0 754 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 DNASE2BQ8WZ79 361 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 ARRDC3Q96B67 414 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 C18orf8Q96DM3 657 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 OMDQ99983 421 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 FEM1AQ9BSK4 669 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 SPON2Q9BUD6 331 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 STK33Q9BYT3 514 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 KLC2Q9H0B6 622 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 BTBD1Q9H0C5 482 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 MUC3BQ9H195 1237 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 WDCPQ9H6R7 721 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 SEPT11Q9NVA2 429 aaKnown RBP6.52□□□□□ -1.37
LGMN-213ENST00000556790 GPATCH2LQ9NWQ4 482 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 ARHGEF38Q9NXL2 777 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 KIAA1522Q9P206 1035 aaPredicted RBP6.52□□□□□ -1.37
LGMN-213ENST00000556790 DACH1Q9UI36 760 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 VPS51Q9UID3 782 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 TMEM59LQ9UK28 342 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 VPS28Q9UK41 221 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 ANGPTL2Q9UKU9 493 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 ANKRD6Q9Y2G4 727 aa6.52□□□□□ -1.37
LGMN-213ENST00000556790 FCF1Q9Y324 198 aaKnown RBP6.52□□□□□ -1.37
LGMN-213ENST00000556790 ITIH6Q6UXX5 1313 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 TBC1D3DA0A087WVF3 549 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 TBC1D3IA0A087WXS9 549 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 TBC1D3EA0A087X179 549 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 TBC1D3KA0A087X1G2 549 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.51□□□□□ -1.37
LGMN-213ENST00000556790 EDDM13A0A1B0GTR0 161 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 A0A1B0GVM2 712 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 FAM149AA5PLN7 773 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 TBC1D3FA6NER0 549 aaPredicted RBP6.51□□□□□ -1.37
LGMN-213ENST00000556790 TCAF2A6NFQ2 919 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 TBC1D3LB9A6J9 549 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 CYP1A1P04798 512 aaPredicted RBP6.51□□□□□ -1.37
LGMN-213ENST00000556790 RHOCP08134 193 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 ATXN1LP0C7T5 689 aaKnown RBP6.51□□□□□ -1.37
LGMN-213ENST00000556790 TBC1D3HP0C7X1 549 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 MYF5P13349 255 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 CEACAM1P13688 526 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 PRLRP16471 622 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 ITIH2P19823 946 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 EEF1GP26641 437 aaKnown RBP6.51□□□□□ -1.37
LGMN-213ENST00000556790 OXTRP30559 389 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 CDH5P33151 784 aaPredicted RBP6.51□□□□□ -1.37
LGMN-213ENST00000556790 RFC1P35251 1148 aaPredicted RBP6.51□□□□□ -1.37
LGMN-213ENST00000556790 SOX5P35711 763 aa6.51□□□□□ -1.37
LGMN-213ENST00000556790 GABRB2P47870 512 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms