RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 TARSL2A2RTX5 802 aaKnown RBP10.61□□□□□ -0.71
SHMT2-224ENST00000556737 LRRC53A6NM62 1247 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 GOLGA6L6A8MZA4 724 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 E9PAM4 449 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 MID1O15344 667 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 ADRB1P08588 477 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 FERP16591 822 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 MAOBP27338 520 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 MAPK8P45983 427 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 ZNF75DP51815 510 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 METAP1P53582 386 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 OXCT1P55809 520 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 HDAC4P56524 1084 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 ATP11AP98196 1134 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 BNC1Q01954 994 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 SULT2A1Q06520 285 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 CST6Q15828 149 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 WDR45BQ5MNZ6 344 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 PPP1R15BQ5SWA1 713 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 RNF219Q5W0B1 726 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-224ENST00000556737 SND1Q7KZF4 910 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHMT2-224ENST00000556737 IRF2BP2Q7Z5L9 587 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 TFAP2DQ7Z6R9 452 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 STK40Q8N2I9 435 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 ZCCHC9Q8N567 271 aaKnown RBP10.61□□□□□ -0.71
SHMT2-224ENST00000556737 AADATQ8N5Z0 425 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 OR2I1PQ8NGU4 316 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 C1orf216Q8TAB5 229 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 CENPIQ92674 756 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-224ENST00000556737 FAM131CQ96AQ9 280 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 C1orf74Q96LT6 269 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 NAP1L5Q96NT1 182 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-224ENST00000556737 HAPLN3Q96S86 360 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 ORAI3Q9BRQ5 295 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 XPO4Q9C0E2 1151 aaKnown RBP10.61□□□□□ -0.71
SHMT2-224ENST00000556737 TMEM51Q9NW97 253 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 MPP6Q9NZW5 540 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 ADAM22Q9P0K1 906 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 SUSD2Q9UGT4 822 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 MYO6Q9UM54 1294 aa10.61□□□□□ -0.71
SHMT2-224ENST00000556737 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-224ENST00000556737 TMEM131Q92545 1883 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 A0A0D9SEW6 157 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 ATP9BO43861 1147 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 SNAP91O60641 907 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 GJB3O75712 270 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 KCNK5O95279 499 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 SEMA4FO95754 770 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 CALB1P05937 261 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 IGHV4-34P06331 123 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 RHOCP08134 193 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 SDC4P31431 198 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 RFC1P35251 1148 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 DRD3P35462 400 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 PBX1P40424 430 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 PSMD8P48556 350 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 NRG1Q02297 640 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 C1QBPQ07021 282 aaKnown RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 CCDC173Q0VFZ6 552 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 GRIK2Q13002 908 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 ZNF177Q13360 481 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 ELAVL3Q14576 367 aaKnown RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 CDO1Q16878 200 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 TTC31Q49AM3 519 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 SYCP2LQ5T4T6 812 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 ACBD5Q5T8D3 534 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 SARM1Q6SZW1 724 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 USP30Q70CQ3 517 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 STRADAQ7RTN6 431 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 MMAAQ8IVH4 418 aaKnown RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 RGL4Q8IZJ4 473 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 SH2D3CQ8N5H7 860 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 CCDC185Q8N715 623 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 DCAF4L2Q8NA75 395 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 SPC24Q8NBT2 197 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 BTBD1Q9H0C5 482 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 SEPT11Q9NVA2 429 aaKnown RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 DNAAF2Q9NVR5 837 aaKnown RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 TAS2R14Q9NYV8 317 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 PPARGC1AQ9UBK2 798 aaKnown RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 ADAMTS1Q9UHI8 967 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 VPS51Q9UID3 782 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 VPS28Q9UK41 221 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 SCML1Q9UN30 329 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 HS3ST2Q9Y278 367 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 GON4LQ3T8J9 2241 aa10.6□□□□□ -0.71
SHMT2-224ENST00000556737 ASCC3Q8N3C0 2202 aaKnown RBP10.6□□□□□ -0.71
SHMT2-224ENST00000556737 CNOT1A5YKK6 2376 aaKnown RBP10.59□□□□□ -0.71
SHMT2-224ENST00000556737 A0A1B0GTW7 788 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 A0A1W2PP55 124 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 FAM72CH0Y354 149 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 K7ERQ8 282 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 ARHGAP33O14559 1287 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 GIPC1O14908 333 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 CCP110O43303 1012 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 ZMPSTE24O75844 475 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 MT-CO1P00395 513 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 KRT3P12035 628 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 SRCP12931 536 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms