RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 MRGPRX3Q96LB0 322 aa11.17□□□□□ -0.62
TDP1-212ENST00000555565 FAM81BQ96LP2 452 aa11.17□□□□□ -0.62
TDP1-212ENST00000555565 SLC6A18Q96N87 628 aa11.17□□□□□ -0.62
TDP1-212ENST00000555565 CPXM1Q96SM3 734 aa11.17□□□□□ -0.62
TDP1-212ENST00000555565 TRIM62Q9BVG3 475 aa11.17□□□□□ -0.62
TDP1-212ENST00000555565 CPNE5Q9HCH3 593 aa11.17□□□□□ -0.62
TDP1-212ENST00000555565 SIX2Q9NPC8 291 aa11.17□□□□□ -0.62
TDP1-212ENST00000555565 SUN2Q9UH99 717 aa11.17□□□□□ -0.62
TDP1-212ENST00000555565 AJAP1Q9UKB5 411 aaPredicted RBP11.17□□□□□ -0.62
TDP1-212ENST00000555565 ARID1BQ8NFD5 2236 aaPredicted RBP11.16□□□□□ -0.62
TDP1-212ENST00000555565 A0A1W2PR77 199 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 TYW5A2RUC4 315 aaKnown RBP11.16□□□□□ -0.62
TDP1-212ENST00000555565 LUC7L3O95232 432 aaKnown RBP11.16□□□□□ -0.62
TDP1-212ENST00000555565 APOEP02649 317 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 DNTTP04053 509 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 ASLP04424 464 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 TACR2P21452 398 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 CTSOP43234 321 aaPredicted RBP11.16□□□□□ -0.62
TDP1-212ENST00000555565 MTIF2P46199 727 aaKnown RBP11.16□□□□□ -0.62
TDP1-212ENST00000555565 BNIP3Q12983 259 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 ILKQ13418 452 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 CDH18Q13634 790 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 KCNJ12Q14500 433 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 ARID5BQ14865 1188 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 HNRNPA1L2Q32P51 320 aaKnown RBP11.16□□□□□ -0.62
TDP1-212ENST00000555565 RAP1GAP2Q684P5 730 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 ZNF776Q68DI1 518 aaPredicted RBP11.16□□□□□ -0.62
TDP1-212ENST00000555565 PASD1Q8IV76 773 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 LGI2Q8N0V4 545 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 BTN2A3PQ96KV6 586 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 SLC2A13Q96QE2 648 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 ACE2Q9BYF1 805 aaPredicted RBP11.16□□□□□ -0.62
TDP1-212ENST00000555565 RSPH9Q9H1X1 276 aaPredicted RBP11.16□□□□□ -0.62
TDP1-212ENST00000555565 SGK2Q9HBY8 427 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.16□□□□□ -0.62
TDP1-212ENST00000555565 CHMP5Q9NZZ3 219 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 PCDHGC3Q9UN70 934 aa11.16□□□□□ -0.62
TDP1-212ENST00000555565 PTPN13Q12923 2485 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 TTC34A8MYJ7 566 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 KCNU1A8MYU2 1149 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 FOXN3O00409 490 aaPredicted RBP11.15□□□□□ -0.62
TDP1-212ENST00000555565 SIN3BO75182 1162 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 ITGAVP06756 1048 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 GLI1P08151 1106 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 PNMA6AP0CW24 399 aaPredicted RBP11.15□□□□□ -0.62
TDP1-212ENST00000555565 KRT10P13645 584 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 GLDCP23378 1020 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 EPHA8P29322 1005 aaPredicted RBP11.15□□□□□ -0.62
TDP1-212ENST00000555565 ST8SIA6P61647 398 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 PITRM1Q5JRX3 1037 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 ARHGAP40Q5TG30 622 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 KIAA0895LQ68EN5 471 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 DPY19L2P1Q6NXN4 242 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 CHSY1Q86X52 802 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 CCDC117Q8IWD4 279 aaPredicted RBP11.15□□□□□ -0.62
TDP1-212ENST00000555565 DHX40Q8IX18 779 aaKnown RBP11.15□□□□□ -0.62
TDP1-212ENST00000555565 APCDD1Q8J025 514 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 DEFB106AQ8N104 65 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 ATP6V0D2Q8N8Y2 350 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 KDM1BQ8NB78 822 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 ZNF248Q8NDW4 579 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 PPP1R13BQ96KQ4 1090 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 PRMT1Q99873 361 aaKnown RBP11.15□□□□□ -0.62
TDP1-212ENST00000555565 CLSTN2Q9H4D0 955 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 ASNSD1Q9NWL6 643 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 DDIT4Q9NX09 232 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 SERGEFQ9UGK8 458 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 SLCO3A1Q9UIG8 710 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 DNAJC12Q9UKB3 198 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 CLCA2Q9UQC9 943 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 ERVW-1Q9UQF0 538 aa11.15□□□□□ -0.62
TDP1-212ENST00000555565 BSNQ9UPA5 3926 aa11.15□□□□□ -0.63
TDP1-212ENST00000555565 PLXNA2O75051 1894 aa11.15□□□□□ -0.63
TDP1-212ENST00000555565 F5H5T6 163 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 GRAP2O75791 330 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 ERBB2P04626 1255 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 SRPRAP08240 638 aaKnown RBP11.14□□□□□ -0.63
TDP1-212ENST00000555565 CKMT2P17540 419 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 ABCB4P21439 1286 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 ACP1P24666 158 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 CLCN1P35523 988 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 RXRGP48443 463 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 GALCP54803 685 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 C21orf59P57076 290 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 TMPRSS3P57727 454 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 CDK17Q00537 523 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 ECT2LQ008S8 904 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 PTK2Q05397 1052 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 MAN2A1Q16706 1144 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 TPD52L1Q16890 204 aaPredicted RBP11.14□□□□□ -0.63
TDP1-212ENST00000555565 PROX2Q3B8N5 592 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 DPCR1Q3MIW9 517 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 TTC31Q49AM3 519 aaPredicted RBP11.14□□□□□ -0.63
TDP1-212ENST00000555565 PTPN20Q4JDL3 420 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 EFHC1Q5JVL4 640 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 MIIPQ5JXC2 388 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 C9orf64Q5T6V5 341 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 SMYD5Q6GMV2 418 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 OLFML1Q6UWY5 402 aa11.14□□□□□ -0.63
TDP1-212ENST00000555565 FAM183BPQ6ZVS7 135 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms