RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 GTPBP2Q9BX10 602 aaKnown RBP11.5□□□□□ -0.57
SHMT2-216ENST00000554975 ACP6Q9NPH0 428 aa11.5□□□□□ -0.57
SHMT2-216ENST00000554975 CISHQ9NSE2 258 aa11.5□□□□□ -0.57
SHMT2-216ENST00000554975 SLC12A6Q9UHW9 1150 aa11.5□□□□□ -0.57
SHMT2-216ENST00000554975 ITGA11Q9UKX5 1188 aa11.5□□□□□ -0.57
SHMT2-216ENST00000554975 DSEQ9UL01 958 aa11.5□□□□□ -0.57
SHMT2-216ENST00000554975 ZNF462Q96JM2 2506 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 H0Y626 953 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 TNFRSF10BO14763 440 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 HUS1O60921 280 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 TRIM16O95361 564 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 FAM107AO95990 144 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 CFIP05156 583 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 ABHD2P08910 425 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 HPDP32754 393 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-216ENST00000554975 AVPR1AP37288 418 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 OPRD1P41143 372 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 GPR15P49685 360 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 ATP1A2P50993 1020 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 SNX16P57768 344 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 MYL6P60660 151 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 RBP5P82980 135 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 MESP2Q0VG99 397 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 KLF1Q13351 362 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-216ENST00000554975 PDGFRLQ15198 375 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 ZNF77Q15935 545 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 CRY1Q16526 586 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 GAB4Q2WGN9 574 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 WSCD1Q658N2 575 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 LPCAT2Q7L5N7 544 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 LRRTM3Q86VH5 581 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 ERICH1Q86X53 443 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 SYT12Q8IV01 421 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 PASD1Q8IV76 773 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 CPA6Q8N4T0 437 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 TTC16Q8NEE8 873 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 BTBD6Q96KE9 485 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 SLC22A12Q96S37 553 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 CCDC77Q9BR77 488 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 OXCT2Q9BYC2 517 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-216ENST00000554975 CCDC86Q9H6F5 360 aaKnown RBP11.49□□□□□ -0.57
SHMT2-216ENST00000554975 HSFX1Q9UBD0 423 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 RSPH14Q9UHP6 348 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 PILRBQ9UKJ0 227 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 MMP17Q9ULZ9 603 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 CABIN1Q9Y6J0 2220 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 PTPRQQ9UMZ3 2332 aa11.49□□□□□ -0.57
SHMT2-216ENST00000554975 TMEM191CA6NGB0 347 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 RIPK2O43353 540 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 C1QL1O75973 258 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 CYP11A1P05108 521 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 SETSIPP0DME0 302 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 RALAP11233 206 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 SSR1P43307 286 aaKnown RBP11.48□□□□□ -0.57
SHMT2-216ENST00000554975 ASPAP45381 313 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 CCT5P48643 541 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 TUFMP49411 452 aaKnown RBP11.48□□□□□ -0.57
SHMT2-216ENST00000554975 MYO1EQ12965 1108 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 USP4Q13107 963 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 NR1H3Q13133 447 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 VEPH1Q14D04 833 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 TRADDQ15628 312 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 ZNF423Q2M1K9 1284 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 EML3Q32P44 896 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 MAP7D1Q3KQU3 841 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 ZFYVE27Q5T4F4 411 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 SDHAF4Q5VUM1 108 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 PEAR1Q5VY43 1037 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-216ENST00000554975 RELL1Q8IUW5 271 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 MINDY1Q8N5J2 469 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 DEFB119Q8N690 84 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 LRRC52Q8N7C0 313 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 OSCP1Q8WVF1 389 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 ADAMTS14Q8WXS8 1223 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 SERPINB12Q96P63 405 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 CYP2S1Q96SQ9 504 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 ZCWPW1Q9H0M4 648 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 LINC00597Q9H2U6 94 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 KIF9Q9HAQ2 790 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 ZDHHC4Q9NPG8 344 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 DUS2Q9NX74 493 aaKnown RBP11.48□□□□□ -0.57
SHMT2-216ENST00000554975 BCCIPQ9P287 314 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHMT2-216ENST00000554975 KIAA1257Q9ULG3 409 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 NOVA2Q9UNW9 492 aaKnown RBP11.48□□□□□ -0.57
SHMT2-216ENST00000554975 SHOC2Q9UQ13 582 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 SNX9Q9Y5X1 595 aa11.48□□□□□ -0.57
SHMT2-216ENST00000554975 SGK1O00141 431 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 RASGRF2O14827 1237 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 SH3BP5O60239 455 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 FTH1P19P0C7X4 201 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 HAPLN1P10915 354 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-216ENST00000554975 VDRP11473 427 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 CD19P15391 556 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 BRD2P25440 801 aaKnown RBP11.47□□□□□ -0.57
SHMT2-216ENST00000554975 CORO7P57737 925 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 MAGOHP61326 146 aaKnown RBP11.47□□□□□ -0.57
SHMT2-216ENST00000554975 TSPY1Q01534 308 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 ZNF268Q14587 947 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-216ENST00000554975 LYSMD4Q5XG99 296 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 AADACL2Q6P093 401 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms