RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SERPINB11Q96P15 392 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 OSMRQ99650 979 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 TLR8Q9NR97 1041 aaKnown RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 DUSP12Q9UNI6 340 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 TMA7Q9Y2S6 64 aaKnown RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 TMEM150BA6NC51 233 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 PSMD12O00232 456 aaPredicted RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 FSCN2O14926 492 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 HOXA2O43364 376 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 NECAB2Q7Z6G3 386 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 ZDHHC13Q8IUH4 622 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 ITFG1Q8TB96 612 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 KLHL20Q9Y2M5 609 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 C2CD2Q9Y426 696 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 PPP2R3BQ9Y5P8 575 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 ZMYM2Q9UBW7 1377 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 CBX4O00257 560 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 CD3EAPO15446 510 aaKnown RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 HS6ST1O60243 411 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 YBX3P16989 372 aaKnown RBP eCLIP14.19□□□□□ -0.141e-6■■□□□ 14.4
VTI1B-204ENST00000554659 LRPAP1P30533 357 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 MMP13P45452 471 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 C16orf46Q6P387 395 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 CYP4Z2PQ8N1L4 340 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 POPDC2Q9HBU9 364 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 SPACA6W5XKT8 324 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 PNMA8CA0A1B0GUJ8 204 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 ZNF7P17097 686 aaPredicted RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 AXLP30530 894 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 RPL22P35268 128 aaKnown RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 TUBP50607 506 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 PKNOX1P55347 436 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 TBX4P57082 545 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 DHDDSQ86SQ9 333 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 PHF13Q86YI8 300 aaPredicted RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 PSTKQ8IV42 348 aaKnown RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 METTL6Q8TCB7 284 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 MRPS31Q92665 395 aaKnown RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 SEMA4DQ92854 862 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 GRIP2Q9C0E4 1043 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 SPATC1LQ9H0A9 340 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 DDX4Q9NQI0 724 aaKnown RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 PREX1Q8TCU6 1659 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 WFS1O76024 890 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 FYNP06241 537 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 PCNAP12004 261 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 CHKAP35790 457 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 GSSP48637 474 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 ZNF143P52747 638 aaPredicted RBP14.18□□□□□ -0.14
VTI1B-204ENST00000554659 FMO1Q01740 532 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 GRIK4Q16099 956 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 ZNF410Q86VK4 478 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 SLC2A14Q8TDB8 520 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 BHMTQ93088 406 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 MRPL48Q96GC5 212 aaKnown RBP14.18□□□□□ -0.14
VTI1B-204ENST00000554659 ZBTB45Q96K62 511 aaPredicted RBP14.18□□□□□ -0.14
VTI1B-204ENST00000554659 PORCNQ9H237 461 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 ACSS3Q9H6R3 686 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 ATAD3AQ9NVI7 634 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 REXO2Q9Y3B8 237 aaKnown RBP14.18□□□□□ -0.14
VTI1B-204ENST00000554659 TISP43B9A030 160 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 BIRC5O15392 142 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 BMT2Q1RMZ1 405 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 TTC27Q6P3X3 843 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 TMEM132CQ8N3T6 1108 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 NARS2Q96I59 477 aaKnown RBP14.18□□□□□ -0.14
VTI1B-204ENST00000554659 ANAPC2Q9UJX6 822 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 IPPQ9Y573 584 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 SPATA31D1Q6ZQQ2 1576 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 RBAK-RBAKDNI3L0D1 243 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 ADRB2P07550 413 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 ANXA6P08133 673 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 ERVK-10P10266 1014 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 CYP2A7P20853 494 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 HK2P52789 917 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 TMEM132BQ14DG7 1078 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 LY6KQ17RY6 165 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 SPANXN2Q5MJ10 180 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 POLNQ7Z5Q5 900 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 EPHX4Q8IUS5 362 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 PPP1R14AQ96A00 147 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 TMEM169Q96HH4 297 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 SEMA6AQ9H2E6 1030 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 TAF4O00268 1085 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 TNFRSF21O75509 655 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 COX4I1P13073 169 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 ATP6V1C1P21283 382 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 OVOS1Q6IE37 1185 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 IRF2BP2Q7Z5L9 587 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 OOSP2Q86WS3 158 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 PGBD3Q8N328 593 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 SPPL2AQ8TCT8 520 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 MKL1Q969V6 931 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 PADI4Q9UM07 663 aa14.18□□□□□ -0.14
VTI1B-204ENST00000554659 PTGES3LE9PB15 166 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 C2CD2LO14523 706 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 KATNA1O75449 491 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 GSTT1P30711 240 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 PIK3CGP48736 1102 aa14.17□□□□□ -0.14
VTI1B-204ENST00000554659 RAB27AP51159 221 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms