RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 NCF2P19878 526 aaPredicted RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 ARNTP27540 789 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 PIK3R1P27986 724 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 MAPK4P31152 587 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 SLC26A3P40879 764 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 GRIA1P42261 906 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 HCAR3P49019 387 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 HLCSP50747 726 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 VAC14Q08AM6 782 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 BST2Q10589 180 aaKnown RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 MMRN1Q13201 1228 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 SLC36A3Q495N2 470 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 ATAD3CQ5T2N8 411 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 SLC16A12Q6ZSM3 486 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 CHSY3Q70JA7 882 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 TFAP2DQ7Z6R9 452 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 CATSPER3Q86XQ3 398 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 ADGRG5Q8IZF4 528 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 PGAM4Q8N0Y7 254 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 ABTB2Q8N961 1025 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 KYQ8NBH2 561 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 PSD4Q8NDX1 1056 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 OR5H6Q8NGV6 325 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 OR6F1Q8NGZ6 308 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 GRPEL2Q8TAA5 225 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 SGCDQ92629 289 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 FKBP10Q96AY3 582 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 HDAC11Q96DB2 347 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 CFAP36Q96G28 342 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 DUS3LQ96G46 650 aaKnown RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 TOE1Q96GM8 510 aaKnown RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 LENG8Q96PV6 779 aaPredicted RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 ADI1Q9BV57 179 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 RUSC1Q9BVN2 902 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 C1QTNF7Q9BXJ2 289 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 ZBTB3Q9H5J0 574 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 FAM96AQ9H5X1 160 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 PCDH9Q9HC56 1237 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 CNNM1Q9NRU3 951 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 TMEM260Q9NX78 707 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 ZNF221Q9UK13 617 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 AP3M1Q9Y2T2 418 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 FOCADQ5VW36 1801 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 SLX4Q8IY92 1834 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 MAGEB6P1A0A0J9YX57 407 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 TCRBV9S1A1TA0A576 114 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 PSTPIP1O43586 416 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 NDUFS2O75306 463 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 CCNKO75909 580 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 TOMM70O94826 608 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 TRIM49P0CI25 452 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 TRIM49CP0CI26 452 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 MBL2P11226 248 aaPredicted RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 SLC5A1P13866 664 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 RPL17P18621 184 aaKnown RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 CYP7A1P22680 504 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 CCND2P30279 289 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 RFC4P35249 363 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 PSMC2P35998 433 aaKnown RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 SLC1A6P48664 564 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 POU6F2P78424 691 aaPredicted RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 SMARCB1Q12824 385 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 TARDBPQ13148 414 aaKnown RBP eCLIP9.72□□□□□ -0.85
SIX4-202ENST00000554079 SLC13A2Q13183 592 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 SNTA1Q13424 505 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 COG2Q14746 738 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 NFIL3Q16649 462 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 VWA5B1Q5TIE3 1220 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 SHEQ5VZ18 495 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 ZBTB49Q6ZSB9 765 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 KATNAL2Q8IYT4 538 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 CADM2Q8N3J6 435 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 ZCCHC7Q8N3Z6 543 aaKnown RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 RNF148Q8N7C7 305 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 NAT8LQ8N9F0 302 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 LEMD2Q8NC56 503 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 VPS37AQ8NEZ2 397 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 PNPT1Q8TCS8 783 aaKnown RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 HTRA1Q92743 480 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 USP13Q92995 863 aaPredicted RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 OMA1Q96E52 524 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 SORT1Q99523 831 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 KCNN2Q9H2S1 579 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 ZHX3Q9H4I2 956 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 C6orf50Q9HD87 102 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 PNPOQ9NVS9 261 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 UCKL1Q9NWZ5 548 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 CNOT6Q9ULM6 557 aaKnown RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 DRG1Q9Y295 367 aaKnown RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 DICER1Q9UPY3 1922 aaKnown RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 POTEB3A0JP26 581 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 C12orf71A8MTZ7 269 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 C9IYK1 514 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 NDUFA2O43678 99 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 BCAS1O75363 584 aaPredicted RBP9.72□□□□□ -0.85
SIX4-202ENST00000554079 ZNF254O75437 659 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 TOM1L1O75674 476 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 MFN2O95140 757 aa9.72□□□□□ -0.85
SIX4-202ENST00000554079 EGFRP00533 1210 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms