RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 C1orf220Q5T0J3 134 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 CEP135Q66GS9 1140 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 INTS8Q75QN2 995 aaKnown RBP15.78■□□□□ 0.12
CACNB3-220ENST00000551716 KCTD13Q8WZ19 329 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 RPL10LQ96L21 214 aaKnown RBP15.78■□□□□ 0.12
CACNB3-220ENST00000551716 CISHQ9NSE2 258 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 CSNK1G3Q9Y6M4 447 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 LY6G6EA0A0G2JKS1 128 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 A0A1W2PNU3 283 aaPredicted RBP15.77■□□□□ 0.12
CACNB3-220ENST00000551716 CPED1A4D0V7 1026 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 ALOX15BO15296 676 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 SLC31A1O15431 190 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 ZNF18P17022 549 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 GCLMP48507 274 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 VASPP50552 380 aaPredicted RBP15.77■□□□□ 0.12
CACNB3-220ENST00000551716 OXCT1P55809 520 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 NUCB2P80303 420 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 CNTN1Q12860 1018 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 STK38Q15208 465 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 MS4A13Q5J8X5 152 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 AGBL4Q5VU57 503 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 FAM173BQ6P4H8 233 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 FOXR1Q6PIV2 292 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 IRGQQ8WZA9 623 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 USP28Q96RU2 1077 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 CALN1Q9BXU9 219 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 SALL4Q9UJQ4 1053 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 PPM1HQ9ULR3 514 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 PCDHGA7Q9Y5G6 932 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 U3KQA8 63 aa15.77■□□□□ 0.12
CACNB3-220ENST00000551716 DOPEY2Q9Y3R5 2298 aa15.77■□□□□ 0.11
CACNB3-220ENST00000551716 CCDC187A0A096LP49 1063 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 H3BM21 787 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 EFSO43281 561 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 PPP6R2O75170 966 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 PPFIA2O75334 1257 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 MYF5P13349 255 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 KRT13P13646 458 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 HNRNPA2B1P22626 353 aaKnown RBP15.76■□□□□ 0.11
CACNB3-220ENST00000551716 GTF2H1P32780 548 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 RPIAP49247 311 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 NASPP49321 788 aaPredicted RBP15.76■□□□□ 0.11
CACNB3-220ENST00000551716 GOLGA7BQ2TAP0 167 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 DCAF6Q58WW2 860 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 NADSYN1Q6IA69 706 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 MMS22LQ6ZRQ5 1243 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 EFL1Q7Z2Z2 1120 aaKnown RBP15.76■□□□□ 0.11
CACNB3-220ENST00000551716 C14orf80Q86SX3 495 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 ZSCAN1Q8NBB4 408 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 EXTL1Q92935 676 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 GLMNQ92990 594 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 TATDN2Q93075 761 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 PRICKLE1Q96MT3 831 aaPredicted RBP15.76■□□□□ 0.11
CACNB3-220ENST00000551716 BLZF1Q9H2G9 400 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 KCTD10Q9H3F6 313 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 DNAJC28Q9NX36 388 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 TSPAN16Q9UKR8 245 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 KIAA1257Q9ULG3 409 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 CA5BQ9Y2D0 317 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 HS3ST3A1Q9Y663 406 aa15.76■□□□□ 0.11
CACNB3-220ENST00000551716 TLN1Q9Y490 2541 aaKnown RBP15.76■□□□□ 0.11
CACNB3-220ENST00000551716 EME2A4GXA9 379 aaPredicted RBP15.75■□□□□ 0.11
CACNB3-220ENST00000551716 TMX2-CTNND1H3BSU7 103 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 TULP2O00295 520 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 TPP1O14773 563 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 MCF2LO15068 1137 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 CALUO43852 315 aaPredicted RBP15.75■□□□□ 0.11
CACNB3-220ENST00000551716 SETSIPP0DME0 302 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 PDIA4P13667 645 aaKnown RBP15.75■□□□□ 0.11
CACNB3-220ENST00000551716 DAOAP59103 153 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 EIF3IQ13347 325 aaKnown RBP15.75■□□□□ 0.11
CACNB3-220ENST00000551716 NNTQ13423 1086 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 CDKN3Q16667 212 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 KRT39Q6A163 491 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 ABI3BPQ7Z7G0 1075 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 APCDD1Q8J025 514 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 CFAP52Q8N1V2 620 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 OR13H1Q8NG92 308 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 FRS2Q8WU20 508 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 ARRDC3Q96B67 414 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 ZSCAN16Q9H4T2 348 aaPredicted RBP15.75■□□□□ 0.11
CACNB3-220ENST00000551716 TMEM8AQ9HCN3 771 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 WDR70Q9NW82 654 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 SEPT10Q9P0V9 454 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 SARDHQ9UL12 918 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 TLR6Q9Y2C9 796 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 LRRK2Q5S007 2527 aa15.75■□□□□ 0.11
CACNB3-220ENST00000551716 FLNCQ14315 2725 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 NOTCH2Q04721 2471 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 A0A1W2PQU0 124 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 SPTLC2O15270 562 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 POLR2DO15514 142 aaKnown RBP15.74■□□□□ 0.11
CACNB3-220ENST00000551716 PRLRP16471 622 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 AFMP43652 599 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 STK19P49842 368 aaPredicted RBP15.74■□□□□ 0.11
CACNB3-220ENST00000551716 PLK1P53350 603 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 NFKB2Q00653 900 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 TLE1Q04724 770 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 PPP3CAQ08209 521 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 STK4Q13043 487 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms