RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 IQCB1Q15051 598 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 ANKRD1Q15327 319 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 P3H1Q32P28 736 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 EPC2Q52LR7 807 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 PLA1AQ53H76 456 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 METTL24Q5JXM2 366 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 TRIM68Q6AZZ1 485 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 LIN54Q6MZP7 749 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 RINT1Q6NUQ1 792 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 TCTN3Q6NUS6 607 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.14□□□□□ -1.75
LIMA1-208ENST00000551691 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-208ENST00000551691 RALYLQ86SE5 291 aaKnown RBP4.14□□□□□ -1.75
LIMA1-208ENST00000551691 TMTC1Q8IUR5 882 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 CCDC28AQ8IWP9 274 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 SPARTQ8N0X7 666 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 FITM2Q8N6M3 262 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 OR6Y1Q8NGX8 325 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 ZFP28Q8NHY6 868 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 OTUD7AQ8TE49 926 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-208ENST00000551691 WDR60Q8WVS4 1066 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 CPT1BQ92523 772 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 HTRA1Q92743 480 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 HVCN1Q96D96 273 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 EID2BQ96D98 161 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 ERP27Q96DN0 273 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 KAZALD1Q96I82 304 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 SMOQ99835 787 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 SDF4Q9BRK5 362 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 GSTO2Q9H4Y5 243 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 SLITRK6Q9H5Y7 841 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 ZBTB26Q9HCK0 441 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 AASSQ9UDR5 926 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 FEM1BQ9UK73 627 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 ADAM29Q9UKF5 820 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 CA14Q9ULX7 337 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 NR2E1Q9Y466 385 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 CTDP1Q9Y5B0 961 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-208ENST00000551691 ASTN1O14525 1302 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 MYO10Q9HD67 2058 aa4.14□□□□□ -1.75
LIMA1-208ENST00000551691 DMXL2Q8TDJ6 3036 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 A0A1W2PRX2 142 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 FSD2A1L4K1 749 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 CXorf49A8MYA2 514 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-208ENST00000551691 PRR5-ARHGAP8B1AHC4 643 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 B4E171 279 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 PJA2O43164 708 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 DNPH1O43598 174 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 TIPRLO75663 272 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 DNAJB5O75953 348 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 KIF20AO95235 890 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 ASNSP08243 561 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 ZNF888P0CJ79 500 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-208ENST00000551691 FCER1AP12319 257 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 ACTN1P12814 892 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 ATP1A3P13637 1013 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 PECAM1P16284 738 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-208ENST00000551691 BTF3P20290 206 aaKnown RBP4.13□□□□□ -1.75
LIMA1-208ENST00000551691 TSPAN7P41732 249 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 WNT3P56703 355 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 RNASE9P60153 205 aaKnown RBP4.13□□□□□ -1.75
LIMA1-208ENST00000551691 VAMP2P63027 116 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 DGCR2P98153 550 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 CUL4BQ13620 913 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 ACVR2BQ13705 512 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 ANGPT1Q15389 498 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 SLC5A9Q2M3M2 681 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 NRN1LQ496H8 165 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 ATXN7L2Q5T6C5 722 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-208ENST00000551691 AGAP9Q5VTM2 703 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 PLAG1Q6DJT9 500 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 Q6ZUG5 572 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 LARP4Q71RC2 724 aaKnown RBP eCLIP4.13□□□□□ -1.75
LIMA1-208ENST00000551691 RRAGAQ7L523 313 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 TBC1D1Q86TI0 1168 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-208ENST00000551691 SLC44A2Q8IWA5 706 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-208ENST00000551691 LILRA3Q8N6C8 439 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-208ENST00000551691 CPT1CQ8TCG5 803 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 STT3BQ8TCJ2 826 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 TFAP2CQ92754 450 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 RILPL2Q969X0 211 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 CEP95Q96GE4 821 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 LMF1Q96S06 567 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 ADOQ96SZ5 270 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 RAD9AQ99638 391 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 BARD1Q99728 777 aaKnown RBP4.13□□□□□ -1.75
LIMA1-208ENST00000551691 NDC1Q9BTX1 674 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 SLC25A32Q9H2D1 315 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 PDCL3Q9H2J4 239 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 C12orf65Q9H3J6 166 aaKnown RBP4.13□□□□□ -1.75
LIMA1-208ENST00000551691 FAM83DQ9H4H8 585 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 MLXIPQ9HAP2 919 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 GPR35Q9HC97 309 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 PREBQ9HCU5 417 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 CLIC5Q9NZA1 410 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 CD207Q9UJ71 328 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 CDYLQ9Y232 598 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 HPSEQ9Y251 543 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 CNPY2Q9Y2B0 182 aa4.13□□□□□ -1.75
LIMA1-208ENST00000551691 ATAD5Q96QE3 1844 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms