RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 SEC16BQ96JE7 1060 aa9.4□□□□□ -0.9
TMEM116-213ENST00000550831 BTN2A3PQ96KV6 586 aa9.4□□□□□ -0.9
TMEM116-213ENST00000550831 KCNK9Q9NPC2 374 aa9.4□□□□□ -0.9
TMEM116-213ENST00000550831 GMIPQ9P107 970 aa9.4□□□□□ -0.9
TMEM116-213ENST00000550831 RSPH14Q9UHP6 348 aa9.4□□□□□ -0.9
TMEM116-213ENST00000550831 VPS9D1Q9Y2B5 631 aa9.4□□□□□ -0.9
TMEM116-213ENST00000550831 HBS1LQ9Y450 684 aaKnown RBP9.4□□□□□ -0.9
TMEM116-213ENST00000550831 HS3ST4Q9Y661 456 aa9.4□□□□□ -0.9
TMEM116-213ENST00000550831 ABHD14A-ACY1A0A1B0GW23 586 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 E9PAM4 449 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 MAFKO60675 156 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 EFCAB14O75071 495 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 KRT37O76014 449 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 ABLIM3O94929 683 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 SNRPAP09012 282 aaKnown RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 DHRS4L1P0CG22 281 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 CPB1P15086 417 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 RHOQP17081 205 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 MAGEA10P43363 369 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 NPY2RP49146 381 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 TUFMP49411 452 aaKnown RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 GPR15P49685 360 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 TBX4P57082 545 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 TLE2Q04725 743 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 ZBTB17Q13105 803 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 SPARCL1Q14515 664 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 EFTUD2Q15029 972 aaKnown RBP eCLIP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 PDK4Q16654 411 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 QPCTQ16769 361 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 SPANXN3Q5MJ09 141 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 PIK3R6Q5UE93 754 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 RSPO2Q6UXX9 243 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 RNF19BQ6ZMZ0 732 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 CAPN12Q6ZSI9 719 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 CPLX4Q7Z7G2 160 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 SRLQ86TD4 932 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 LINC00523Q86TU6 105 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 PRPF39Q86UA1 669 aaKnown RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 TMEM135Q86UB9 458 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 CEP57Q86XR8 500 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 LRRC34Q8IZ02 419 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 CACNA2D3Q8IZS8 1091 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 TAB3Q8N5C8 712 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 ATP6V0D2Q8N8Y2 350 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 PDZD8Q8NEN9 1154 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 LRRN4Q8WUT4 740 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 BCL7CQ8WUZ0 217 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 FBXO32Q969P5 355 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 TOP1MTQ969P6 601 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 AZIN2Q96A70 460 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 OXNAD1Q96HP4 312 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 SCLYQ96I15 445 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 IGSF21Q96ID5 467 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 MYRFLQ96LU7 910 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 FCRL5Q96RD9 977 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 PLCD4Q9BRC7 762 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 VPS11Q9H270 941 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 C11orf49Q9H6J7 331 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 LRRC40Q9H9A6 602 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 TMEM248Q9NWD8 314 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 KLHL8Q9P2G9 620 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 ZNF212Q9UDV6 495 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 STK39Q9UEW8 545 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 AFF4Q9UHB7 1163 aaKnown RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 SFMBT1Q9UHJ3 866 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 IKBKGQ9Y6K9 419 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 CHD5Q8TDI0 1954 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 NUP205Q92621 2012 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 MYO18AQ92614 2054 aaKnown RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 NYNRINQ9P2P1 1898 aaKnown RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 UNC80Q8N2C7 3258 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 FAM237BA0A1B0GVD1 139 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 A0A1W2PPM1 405 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 KCNK1O00180 336 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 ZBTB24O43167 697 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 MSI1O43347 362 aaKnown RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 SNX3O60493 162 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 KRT38O76015 456 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 USP1O94782 785 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 IL1BP01584 269 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 SOD2P04179 222 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 ALADP13716 330 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 SYN1P17600 705 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 KRT4P19013 534 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 TAC1P20366 129 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 GRIA1P42261 906 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 ALDH7A1P49419 539 aaKnown RBP9.39□□□□□ -0.91
TMEM116-213ENST00000550831 TUBP50607 506 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 NEK3P51956 506 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 CORO7P57737 925 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 DSG1Q02413 1049 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 TAF10Q12962 218 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 PRPSAP1Q14558 356 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 TRIM60Q495X7 471 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 MS4A13Q5J8X5 152 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 STXBP5Q5T5C0 1151 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 RASIP1Q5U651 963 aa9.39□□□□□ -0.91
TMEM116-213ENST00000550831 NAPEPLDQ6IQ20 393 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms