RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 SLC7A9P82251 487 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 TNK2Q07912 1038 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 NR1H3Q13133 447 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 HNRNPDQ14103 355 aaKnown RBP12.87□□□□□ -0.35
CACNB3-217ENST00000550483 RAB30Q15771 203 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 KRT71Q3SY84 523 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 ADGRF1Q5T601 910 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 PLPP4Q5VZY2 271 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 RAP1GAP2Q684P5 730 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 PRUNE1Q86TP1 453 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 LINC00523Q86TU6 105 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 ARHGAP12Q8IWW6 846 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 ZBED8Q8IZ13 594 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 ZNF567Q8N184 647 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 MAML1Q92585 1016 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 ATP6V1G3Q96LB4 118 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 TEKT5Q96M29 485 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 ZNF599Q96NL3 588 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 UHRF1Q96T88 793 aaPredicted RBP12.87□□□□□ -0.35
CACNB3-217ENST00000550483 MAGEH1Q9H213 219 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 GBA3Q9H227 469 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 ZDHHC7Q9NXF8 308 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 MFHAS1Q9Y4C4 1052 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 SNX10Q9Y5X0 201 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 TCF20Q9UGU0 1960 aaKnown RBP12.87□□□□□ -0.35
CACNB3-217ENST00000550483 MUC6Q6W4X9 2439 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 LCHNA4D1U4 455 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 H3BNC9 293 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 DFFAO00273 331 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 RASGRF2O14827 1237 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 CACNG3O60359 315 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 ANXA9O76027 345 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 NEBLO76041 1014 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 SUN1O94901 812 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 MAP3K6O95382 1288 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 METTL18O95568 372 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 AGTP01019 485 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 HMBSP08397 361 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 CCNB1P14635 433 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 GABRR2P28476 465 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 CORO1AP31146 461 aaKnown RBP12.86□□□□□ -0.35
CACNB3-217ENST00000550483 OXCT1P55809 520 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 ERVFC1P60507 584 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 IL10RBQ08334 325 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 KYNUQ16719 465 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 KLHL38Q2WGJ6 581 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 ARHGAP15Q53QZ3 475 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 ANKRD22Q5VYY1 191 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 LRRC8BQ6P9F7 803 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 C14orf80Q86SX3 495 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 SETD3Q86TU7 594 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-217ENST00000550483 TDRPQ86YL5 185 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 TMC8Q8IU68 726 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 KLHDC8BQ8IXV7 354 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 BBS5Q8N3I7 341 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 KIAA1958Q8N8K9 716 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 ZNF557Q8N988 423 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-217ENST00000550483 FAM76AQ8TAV0 307 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 IL12RB2Q99665 862 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 SLC39A8Q9C0K1 460 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 LRRC40Q9H9A6 602 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 ALG13Q9NP73 1137 aaKnown RBP12.86□□□□□ -0.35
CACNB3-217ENST00000550483 SEPT10Q9P0V9 454 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 RSPH14Q9UHP6 348 aa12.86□□□□□ -0.35
CACNB3-217ENST00000550483 IPO11Q9UI26 975 aaKnown RBP12.86□□□□□ -0.35
CACNB3-217ENST00000550483 CXorf51AA0A1B0GTR3 108 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 A0A1B0GVM2 712 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 TCAF2A6NFQ2 919 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 RASA4BC9J798 803 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 ZNF197O14709 1029 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 RGS16O15492 202 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-217ENST00000550483 RASA4O43374 803 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 MAFKO60675 156 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 CDH16O75309 829 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 ACSL3O95573 720 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 AP2A1O95782 977 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 PTPN2P17706 415 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 HDCP19113 662 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 OR1E1P30953 314 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 STX2P32856 288 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 PBX2P40425 430 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 MAGEA3P43357 314 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 MMP13P45452 471 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 GEMP55040 296 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 ADGRE1Q14246 886 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 RFTN1Q14699 578 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-217ENST00000550483 BBS9Q3SYG4 887 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 FAM133BQ5BKY9 247 aaKnown RBP12.85□□□□□ -0.35
CACNB3-217ENST00000550483 ARTNQ5T4W7 220 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 NAPEPLDQ6IQ20 393 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 ZNF449Q6P9G9 518 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 TAOK1Q7L7X3 1001 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 TMEM150AQ86TG1 271 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 FAM217AQ8IXS0 508 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 PALM2Q8IXS6 379 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 LGI2Q8N0V4 545 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 CPXM2Q8N436 756 aa12.85□□□□□ -0.35
CACNB3-217ENST00000550483 ATXN2LQ8WWM7 1075 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms