RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 STAT4Q14765 748 aa13.99□□□□□ -0.17
TROAP-211ENST00000549891 KLHL10Q6JEL2 608 aa13.99□□□□□ -0.17
TROAP-211ENST00000549891 TMEM110Q86TL2 294 aa13.99□□□□□ -0.17
TROAP-211ENST00000549891 CCAR2Q8N163 923 aaKnown RBP13.99□□□□□ -0.17
TROAP-211ENST00000549891 TSC1Q92574 1164 aa13.99□□□□□ -0.17
TROAP-211ENST00000549891 RNF34Q969K3 372 aa13.99□□□□□ -0.17
TROAP-211ENST00000549891 FAM131CQ96AQ9 280 aa13.99□□□□□ -0.17
TROAP-211ENST00000549891 FAM81BQ96LP2 452 aa13.99□□□□□ -0.17
TROAP-211ENST00000549891 UBL7Q96S82 380 aaPredicted RBP13.99□□□□□ -0.17
TROAP-211ENST00000549891 NRSN2Q9GZP1 204 aa13.99□□□□□ -0.17
TROAP-211ENST00000549891 ASXL3Q9C0F0 2248 aa13.99□□□□□ -0.17
TROAP-211ENST00000549891 C1QTNF3-AMACRE9PGA6 284 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 CBX4O00257 560 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 WNT9AO14904 365 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 ALOX15BO15296 676 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 PLRG1O43660 514 aaKnown RBP13.98□□□□□ -0.17
TROAP-211ENST00000549891 AFPP02771 609 aaKnown RBP13.98□□□□□ -0.17
TROAP-211ENST00000549891 GLI1P08151 1106 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 CCR1P32246 355 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 PPP2CBP62714 309 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 PPP2CAP67775 309 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 CDK17Q00537 523 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 TARDBPQ13148 414 aaKnown RBP eCLIP13.98□□□□□ -0.17
TROAP-211ENST00000549891 ACCSLQ4AC99 568 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 SETMARQ53H47 684 aaPredicted RBP13.98□□□□□ -0.17
TROAP-211ENST00000549891 HES3Q5TGS1 186 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 SFMBT2Q5VUG0 894 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 ISM2Q6H9L7 571 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 TTI2Q6NXR4 508 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 DENND1BQ6P3S1 775 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 FBXL19Q6PCT2 694 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 ENOSF1Q7L5Y1 443 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 TRIM69Q86WT6 500 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 ELOA2Q8IYF1 753 aaPredicted RBP13.98□□□□□ -0.17
TROAP-211ENST00000549891 CACTIN-AS1Q8N1I8 211 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 PIP4K2CQ8TBX8 421 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 FRS2Q8WU20 508 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 NELFBQ8WX92 580 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 ZNF606Q8WXB4 792 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 BAP1Q92560 729 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 KREMEN1Q96MU8 473 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 FAM204AQ9H8W3 233 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 CYTH4Q9UIA0 394 aa13.98□□□□□ -0.17
TROAP-211ENST00000549891 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.98□□□□□ -0.17
TROAP-211ENST00000549891 TDRD6O60522 2096 aaKnown RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 PRAMEF26H0Y7S4 382 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 THAP12O43422 761 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 VAV1P15498 845 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 CD44P16070 742 aaKnown RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 ZNF18P17022 549 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 GNA15P30679 374 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 EIF2S3P41091 472 aaKnown RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 MARSP56192 900 aaKnown RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 SEMG2Q02383 582 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 CCDC15Q0P6D6 951 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 BNIP3Q12983 259 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 ZNF177Q13360 481 aaPredicted RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 PDCLQ13371 301 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 EIF4EBP2Q13542 120 aaPredicted RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 RTP5Q14D33 572 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 HS1BP3Q53T59 392 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 EFHC1Q5JVL4 640 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 CIR1Q86X95 450 aaPredicted RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 TRIM59Q8IWR1 403 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 RPRD1AQ96P16 312 aaPredicted RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 BBC3Q96PG8 261 aaPredicted RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 PRMT1Q99873 361 aaKnown RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 INTS2Q9H0H0 1204 aaKnown RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 PREBQ9HCU5 417 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 UBE2TQ9NPD8 197 aaPredicted RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 DDIT4Q9NX09 232 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 ARHGAP20Q9P2F6 1191 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 MAN1B1Q9UKM7 699 aa13.97□□□□□ -0.17
TROAP-211ENST00000549891 FARP1Q9Y4F1 1045 aaPredicted RBP13.97□□□□□ -0.17
TROAP-211ENST00000549891 TK2O00142 265 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 MCF2LO15068 1137 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 ATP9BO43861 1147 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 RNGTTO60942 597 aaKnown RBP13.96□□□□□ -0.17
TROAP-211ENST00000549891 HSF2BPO75031 334 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 RTN2O75298 545 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 FGFR1OPO95684 399 aaKnown RBP13.96□□□□□ -0.17
TROAP-211ENST00000549891 MAT2AP31153 395 aaKnown RBP13.96□□□□□ -0.17
TROAP-211ENST00000549891 SNX16P57768 344 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 E2F1Q01094 437 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 CXorf57Q6NSI4 855 aaKnown RBP13.96□□□□□ -0.17
TROAP-211ENST00000549891 FBXL22Q6P050 247 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 SPATS2Q86XZ4 545 aaKnown RBP13.96□□□□□ -0.17
TROAP-211ENST00000549891 CCDC114Q96M63 670 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 NOX5Q96PH1 765 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 FEM1AQ9BSK4 669 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 ASNSD1Q9NWL6 643 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 VPS28Q9UK41 221 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 PPM1HQ9ULR3 514 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 BPTFQ12830 3046 aa13.96□□□□□ -0.17
TROAP-211ENST00000549891 GCN1Q92616 2671 aaKnown RBP13.96□□□□□ -0.18
TROAP-211ENST00000549891 SYNJ2BP-COX16A0A087WUM0 186 aa13.95□□□□□ -0.18
TROAP-211ENST00000549891 CLDN11O75508 207 aa13.95□□□□□ -0.18
TROAP-211ENST00000549891 GLDCP23378 1020 aa13.95□□□□□ -0.18
TROAP-211ENST00000549891 ACP1P24666 158 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms