RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SFMBT1Q9UHJ3 866 aa12.62□□□□□ -0.39
DDX54-206ENST00000549271 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.62□□□□□ -0.39
DDX54-206ENST00000549271 LRRC72A6NJI9 287 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 IRAK2O43187 625 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 SUV39H1O43463 412 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 LZTS3O60299 673 aaPredicted RBP12.61□□□□□ -0.39
DDX54-206ENST00000549271 OPA1O60313 960 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 FGFR1OPO95684 399 aaKnown RBP12.61□□□□□ -0.39
DDX54-206ENST00000549271 CALCAP01258 141 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 DLDP09622 509 aaKnown RBP12.61□□□□□ -0.39
DDX54-206ENST00000549271 CD19P15391 556 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 LINC00303Q3SY05 128 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 C6orf132Q5T0Z8 1188 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 TMEM270Q6UE05 265 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 CHST9Q7L1S5 443 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 RRAGAQ7L523 313 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 PPM1KQ8N3J5 372 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 EDEM1Q92611 657 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 SERAC1Q96JX3 654 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 KREMEN1Q96MU8 473 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 SUN2Q9UH99 717 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 GGA2Q9UJY4 613 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 PCDHB4Q9Y5E5 795 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 TDRD6O60522 2096 aaKnown RBP12.61□□□□□ -0.39
DDX54-206ENST00000549271 KIF26BQ2KJY2 2108 aa12.61□□□□□ -0.39
DDX54-206ENST00000549271 A0A1W2PNU3 283 aaPredicted RBP12.6□□□□□ -0.39
DDX54-206ENST00000549271 CSO75390 466 aaKnown RBP12.6□□□□□ -0.39
DDX54-206ENST00000549271 GABBR2O75899 941 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 ATP5BP06576 529 aaKnown RBP12.6□□□□□ -0.39
DDX54-206ENST00000549271 PABPC1P11940 636 aaKnown RBP12.6□□□□□ -0.39
DDX54-206ENST00000549271 ITGB6P18564 788 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 NFKB2Q00653 900 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 GCNT1Q02742 428 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 CETN1Q12798 172 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 STILQ15468 1287 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 CNGA2Q16280 664 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 ARL13BQ3SXY8 428 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 SLC45A4Q5BKX6 768 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 PIK3R6Q5UE93 754 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 NUGGCQ68CJ6 796 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 XKR5Q6UX68 686 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 CCDC81Q6ZN84 652 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 UNC45BQ8IWX7 931 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 SLC25A45Q8N413 288 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 MFSD2AQ8NA29 543 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 UBA3Q8TBC4 463 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 GPT2Q8TD30 523 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 GANCQ8TET4 914 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 TTC17Q96AE7 1141 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 LMLNQ96KR4 655 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 HSFY1Q96LI6 401 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 SLC46A1Q96NT5 459 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 INTS2Q9H0H0 1204 aaKnown RBP12.6□□□□□ -0.39
DDX54-206ENST00000549271 NUP62CLQ9H1M0 184 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 NEUROG2Q9H2A3 272 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 MTG2Q9H4K7 406 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 ABCB8Q9NUT2 735 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 FZD4Q9ULV1 537 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 CNTN6Q9UQ52 1028 aa12.6□□□□□ -0.39
DDX54-206ENST00000549271 A0A1B0GVM2 712 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 A0A1W2PP55 124 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 MID1O15344 667 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 MSI1O43347 362 aaKnown RBP12.59□□□□□ -0.39
DDX54-206ENST00000549271 LATO43561 262 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 ACSL4O60488 711 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 SDC3O75056 442 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 FBXO21O94952 628 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 CKMT1AP12532 417 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 RPL34P49207 117 aaKnown RBP12.59□□□□□ -0.39
DDX54-206ENST00000549271 SLC11A2P49281 568 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 DAB2P98082 770 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 UBAP2LQ14157 1087 aaKnown RBP12.59□□□□□ -0.39
DDX54-206ENST00000549271 ARID5BQ14865 1188 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 DPCR1Q3MIW9 517 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 FAM133BQ5BKY9 247 aaKnown RBP12.59□□□□□ -0.39
DDX54-206ENST00000549271 MBLAC2Q68D91 279 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 NAPEPLDQ6IQ20 393 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 PMF1Q6P1K2 205 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 IQCHQ86VS3 1027 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 KDM1BQ8NB78 822 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 OR4C6Q8NH72 309 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 FIBINQ8TAL6 211 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 CCDC97Q96F63 343 aaPredicted RBP12.59□□□□□ -0.39
DDX54-206ENST00000549271 MYO19Q96H55 970 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 PRR11Q96HE9 360 aaPredicted RBP12.59□□□□□ -0.39
DDX54-206ENST00000549271 CRACR2AQ9BSW2 395 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 TJP2Q9UDY2 1190 aa12.59□□□□□ -0.39
DDX54-206ENST00000549271 TPX2Q9ULW0 747 aaKnown RBP12.59□□□□□ -0.39
DDX54-206ENST00000549271 CDRT15L2A8MXV6 281 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 EFSO43281 561 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 LTFP02788 710 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 GP1BAP07359 652 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 LCP1P13796 627 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 POLR2EP19388 210 aaKnown RBP12.58□□□□□ -0.4
DDX54-206ENST00000549271 SLC9A1P19634 815 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 BRD2P25440 801 aaKnown RBP12.58□□□□□ -0.4
DDX54-206ENST00000549271 ERCC5P28715 1186 aaPredicted RBP12.58□□□□□ -0.4
DDX54-206ENST00000549271 CD70P32970 193 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 SGSHP51688 502 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 APBA1Q02410 837 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms