RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 KCTD19Q17RG1 926 aaPredicted RBP17.31■□□□□ 0.36
ARFGAP1-220ENST00000547204 HEATR6Q6AI08 1181 aaKnown RBP17.31■□□□□ 0.36
ARFGAP1-220ENST00000547204 ATPAF2Q8N5M1 289 aa17.31■□□□□ 0.36
ARFGAP1-220ENST00000547204 CELF5Q8N6W0 485 aaKnown RBP17.31■□□□□ 0.36
ARFGAP1-220ENST00000547204 CCNYQ8ND76 341 aa17.31■□□□□ 0.36
ARFGAP1-220ENST00000547204 FGF13Q92913 245 aa17.31■□□□□ 0.36
ARFGAP1-220ENST00000547204 TRIM31Q9BZY9 425 aa17.31■□□□□ 0.36
ARFGAP1-220ENST00000547204 SLC39A8Q9C0K1 460 aa17.31■□□□□ 0.36
ARFGAP1-220ENST00000547204 DPH5Q9H2P9 285 aa17.31■□□□□ 0.36
ARFGAP1-220ENST00000547204 FAM114A2Q9NRY5 505 aa17.31■□□□□ 0.36
ARFGAP1-220ENST00000547204 GDE1Q9NZC3 331 aa17.31■□□□□ 0.36
ARFGAP1-220ENST00000547204 VAV1P15498 845 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 SP100P23497 879 aaPredicted RBP17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 TNFRSF8P28908 595 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 OR1E1P30953 314 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 DRG2P55039 364 aaKnown RBP17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 ZNF33AQ06730 810 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 CUL1Q13616 776 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 LRRC49Q8IUZ0 686 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 KIAA1958Q8N8K9 716 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 TDRD5Q8NAT2 981 aaKnown RBP17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 GLIS1Q8NBF1 620 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 RIN3Q8TB24 985 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 LRRN4Q8WUT4 740 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 HTR3CQ8WXA8 447 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 CASKIN2Q8WXE0 1202 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 TMA16Q96EY4 203 aaKnown RBP17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 RIPOR3Q96MK2 946 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 NECTIN4Q96NY8 510 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 NOL6Q9H6R4 1146 aaKnown RBP17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 TBC1D14Q9P2M4 693 aa17.3■□□□□ 0.36
ARFGAP1-220ENST00000547204 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 ARHGAP42A6NI28 874 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 RASA4BC9J798 803 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 RASA4O43374 803 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 RAMP2O60895 175 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 TBL1XO60907 577 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 STK10O94804 968 aaKnown RBP17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 ZSCAN5DPP0CG00 497 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 ETS1P14921 441 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 MTHFRP42898 656 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 YBEYP58557 167 aaPredicted RBP17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 ZNF177Q13360 481 aaPredicted RBP17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 PARP15Q460N3 678 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 MPPE1Q53F39 396 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 FAM78AQ5JUQ0 283 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 C6orf118Q5T5N4 469 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 PRUNE1Q86TP1 453 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 CCDC13Q8IYE1 715 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 SMARCD2Q92925 531 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 P2RY11Q96G91 374 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 SNF8Q96H20 258 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 ASB16Q96NS5 453 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 TSGA13Q96PP4 275 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 POMKQ9H5K3 350 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 CDH7Q9ULB5 785 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 SNX24Q9Y343 169 aa17.29■□□□□ 0.36
ARFGAP1-220ENST00000547204 DYNC1I1O14576 645 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 SLC9A3R1O14745 358 aaPredicted RBP17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 MTSS1O43312 755 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 CCNCP24863 283 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 ACTN2P35609 894 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 ADCY8P40145 1251 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 RPL21P46778 160 aaKnown RBP17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 VPS41P49754 854 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 PAPOLAP51003 745 aaKnown RBP17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 POLD3Q15054 466 aaPredicted RBP17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 P3H1Q32P28 736 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 MPP7Q5T2T1 576 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 SETD3Q86TU7 594 aaPredicted RBP17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 EIF1ADQ8N9N8 165 aaKnown RBP17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 IFT81Q8WYA0 676 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 EDAQ92838 391 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 OTUB2Q96DC9 234 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 HMCESQ96FZ2 354 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 TBC1D30Q9Y2I9 924 aa17.28■□□□□ 0.36
ARFGAP1-220ENST00000547204 DENND4AQ7Z401 1863 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 NYNRINQ9P2P1 1898 aaKnown RBP17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 ILVBLA1L0T0 632 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 C5orf60A6NFR6 353 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 RNF103O00237 685 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 GCATO75600 419 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 LUC7L3O95232 432 aaKnown RBP17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 CYBBP04839 570 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 RHOCP08134 193 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 IVDP26440 423 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 RPL22P35268 128 aaKnown RBP17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 CARSP49589 748 aaKnown RBP17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 GPS1Q13098 491 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 CALCOCO2Q13137 446 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 BRD3Q15059 726 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 TRADDQ15628 312 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 TIGD7Q6NT04 549 aaPredicted RBP17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 C4orf22Q6V702 233 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 CCNI2Q6ZMN8 369 aaPredicted RBP17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 ARHGAP36Q6ZRI8 547 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 BBOF1Q8ND07 529 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 DDI1Q8WTU0 396 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 DEPDC1BQ8WUY9 529 aa17.27■□□□□ 0.36
ARFGAP1-220ENST00000547204 LRRC45Q96CN5 670 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms