RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 HDAC4P56524 1084 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 ATP11AP98196 1134 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 SATB1Q01826 763 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 GRSF1Q12849 480 aaKnown RBP eCLIP11.82□□□□□ -0.52
COPS7A-217ENST00000543537 TAF10Q12962 218 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 CBLBQ13191 982 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 PON2Q15165 354 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 FBXO43Q4G163 708 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 BTBD8Q5XKL5 378 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 SLC9A4Q6AI14 798 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 TRIM68Q6AZZ1 485 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 FSTL4Q6MZW2 842 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 Q6ZS52 159 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 ADAT2Q7Z6V5 191 aaKnown RBP11.82□□□□□ -0.52
COPS7A-217ENST00000543537 CPA6Q8N4T0 437 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 LZTR1Q8N653 840 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 ARFGAP1Q8N6T3 406 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 SH3RF2Q8TEC5 729 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 HSPH1Q92598 858 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 TTC25Q96NG3 672 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 HAPLN3Q96S86 360 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 RNF38Q9H0F5 515 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 OSBPL2Q9H1P3 480 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 TRPC7Q9HCX4 862 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 DUS2Q9NX74 493 aaKnown RBP11.82□□□□□ -0.52
COPS7A-217ENST00000543537 ANAPC5Q9UJX4 755 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 DNAH14Q0VDD8 3507 aa11.82□□□□□ -0.52
COPS7A-217ENST00000543537 BCLAF3A2AJT9 711 aaKnown RBP11.81□□□□□ -0.52
COPS7A-217ENST00000543537 HHLA1C9JL84 531 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 AP3B1O00203 1094 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 TULP2O00295 520 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 KRT14P02533 472 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 NCAM1P13591 858 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 TSHRP16473 764 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 IL1R2P27930 398 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 L1CAMP32004 1257 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 CCR1P32246 355 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 ADRA1BP35368 520 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 GJC1P36383 396 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 CXCR3P49682 368 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 SLC5A3P53794 718 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 PLTPP55058 493 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 EIF3EP60228 445 aaKnown RBP11.81□□□□□ -0.52
COPS7A-217ENST00000543537 SARNPP82979 210 aaKnown RBP11.81□□□□□ -0.52
COPS7A-217ENST00000543537 CDK16Q00536 496 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 DPYSL3Q14195 570 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 PDK1Q15118 436 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 OASLQ15646 514 aaKnown RBP11.81□□□□□ -0.52
COPS7A-217ENST00000543537 ANKRD20A8PQ5CZ79 823 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 BSPRYQ5W0U4 402 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 KAZNQ674X7 775 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 TSSK4Q6SA08 328 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 DDX42Q86XP3 938 aaKnown RBP eCLIP11.81□□□□□ -0.52
COPS7A-217ENST00000543537 IQCKQ8N0W5 287 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 ZMIZ2Q8NF64 920 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 C1orf54Q8WWF1 131 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 SERPINB11Q96P15 392 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 KCNK16Q96T55 309 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 EPAS1Q99814 870 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 ROPN1BQ9BZX4 212 aaPredicted RBP11.81□□□□□ -0.52
COPS7A-217ENST00000543537 PABPC3Q9H361 631 aaKnown RBP11.81□□□□□ -0.52
COPS7A-217ENST00000543537 WDCPQ9H6R7 721 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 ROPN1Q9HAT0 212 aaPredicted RBP11.81□□□□□ -0.52
COPS7A-217ENST00000543537 PCDH18Q9HCL0 1135 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 PAK5Q9P286 719 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 TJP2Q9UDY2 1190 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 TPX2Q9ULW0 747 aaKnown RBP11.81□□□□□ -0.52
COPS7A-217ENST00000543537 FZD10Q9ULW2 581 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 HPCAL4Q9UM19 191 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 AP4E1Q9UPM8 1137 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 SMG5Q9UPR3 1016 aaKnown RBP11.81□□□□□ -0.52
COPS7A-217ENST00000543537 SHOC2Q9UQ13 582 aa11.81□□□□□ -0.52
COPS7A-217ENST00000543537 HELZP42694 1942 aaKnown RBP11.81□□□□□ -0.52
COPS7A-217ENST00000543537 SGK1O00141 431 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 LEFTY2O00292 366 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 SLC9A3R1O14745 358 aaPredicted RBP11.8□□□□□ -0.52
COPS7A-217ENST00000543537 PPP1R12AO14974 1030 aaPredicted RBP11.8□□□□□ -0.52
COPS7A-217ENST00000543537 ATG13O75143 517 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 GRAP2O75791 330 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 GABBR2O75899 941 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 SEC31AO94979 1220 aaKnown RBP11.8□□□□□ -0.52
COPS7A-217ENST00000543537 GJB6O95452 261 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 NFATC1O95644 943 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 RBP3P10745 1247 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 ATP5DP30049 168 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 EIF2DP41214 584 aaKnown RBP11.8□□□□□ -0.52
COPS7A-217ENST00000543537 IFNAR2P48551 515 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 YWHAGP61981 247 aaKnown RBP eCLIP11.8□□□□□ -0.52
COPS7A-217ENST00000543537 COG7P83436 770 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 NRG1Q02297 640 aaPredicted RBP11.8□□□□□ -0.52
COPS7A-217ENST00000543537 NR1H3Q13133 447 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 NOMO1Q15155 1222 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 CDO1Q16878 200 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 C15orf59Q2T9L4 293 aaPredicted RBP11.8□□□□□ -0.52
COPS7A-217ENST00000543537 GAB4Q2WGN9 574 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 P3H1Q32P28 736 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 KCNT1Q5JUK3 1230 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 TTC27Q6P3X3 843 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 LONP2Q86WA8 852 aa11.8□□□□□ -0.52
COPS7A-217ENST00000543537 ADGRG2Q8IZP9 1017 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms