RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 HOXA11P31270 313 aaPredicted RBP13.19□□□□□ -0.3
PTCD2-212ENST00000543322 GNL1P36915 607 aaPredicted RBP13.19□□□□□ -0.3
PTCD2-212ENST00000543322 ALDH1A3P47895 512 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 GTF2A2P52657 109 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 FOLH1Q04609 750 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 ADIGQ0VDE8 80 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 GRAMD1BQ3KR37 738 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 KCTD11Q693B1 232 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 SLC27A1Q6PCB7 646 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 C16orf89Q6UX73 402 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 MAMDC4Q6UXC1 1216 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 ALKAL1Q6UXT8 129 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 ZYG11AQ6WRX3 759 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 ARMCX2Q7L311 632 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 PID1Q7Z2X4 250 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 TMC7Q7Z402 723 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 ARPINQ7Z6K5 226 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 TMEM126BQ8IUX1 230 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 TP53INP2Q8IXH6 220 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 SLC2A13Q96QE2 648 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 C16orf70Q9BSU1 422 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 CAB39LQ9H9S4 337 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 NMRAL1Q9HBL8 299 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 SETD4Q9NVD3 440 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 GDAP2Q9NXN4 497 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 BFARQ9NZS9 450 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 KLHL8Q9P2G9 620 aaPredicted RBP13.19□□□□□ -0.3
PTCD2-212ENST00000543322 RAP2CQ9Y3L5 183 aa13.19□□□□□ -0.3
PTCD2-212ENST00000543322 ERI2A8K979 691 aaKnown RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 PIRO00625 290 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 APOA4P06727 396 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 CYP2B6P20813 491 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 NOS2P35228 1153 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 NUDT2P50583 147 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 CLCN2P51788 898 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 MPP3Q13368 585 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 LSAMPQ13449 338 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 BIRC2Q13490 618 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 HERC3Q15034 1050 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 DLG2Q15700 870 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 DCAF6Q58WW2 860 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 GLRA4Q5JXX5 417 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 FBXO47Q5MNV8 452 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 MARCH8Q5T0T0 291 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 TAPT1Q6NXT6 567 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 PIGZQ86VD9 579 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 SNX32Q86XE0 403 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 CPSF7Q8N684 471 aaKnown RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 NDRG1Q92597 394 aaKnown RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 EMID1Q96A84 441 aaPredicted RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 FAM149B1Q96BN6 582 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 DCUN1D1Q96GG9 259 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 SERPINI1Q99574 410 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 EIF2AQ9BY44 585 aaKnown RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 IL22Q9GZX6 179 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 DRC3Q9H069 523 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 ILKAPQ9H0C8 392 aaPredicted RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 GBA3Q9H227 469 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 MROH8Q9H579 483 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 UBQLN1Q9UMX0 589 aaKnown RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 ANKRD6Q9Y2G4 727 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 RGSL1A5PLK6 1076 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 CAPN8A6NHC0 703 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 KCNK1O00180 336 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 SPTLC1O15269 473 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 HDAC3O15379 428 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 CREB3O43889 395 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 USP12O75317 370 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 CHRNGP07510 517 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 F7P08709 466 aaPredicted RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 CD1EP15812 388 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 PRKAA2P54646 552 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 SH3BGRP55822 239 aaPredicted RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 PPIDQ08752 370 aaKnown RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 NSUN2Q08J23 767 aaKnown RBP eCLIP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 SEMA3BQ13214 749 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 ADGRE1Q14246 886 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 TLR1Q15399 786 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 GRIK4Q16099 956 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 ZNF423Q2M1K9 1284 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 PIGGQ5H8A4 983 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 LIPMQ5VYY2 423 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 BNC2Q6ZN30 1099 aaPredicted RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 SETD3Q86TU7 594 aaPredicted RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 KCNMB4Q86W47 210 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 KYQ8NBH2 561 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 OTUD5Q96G74 571 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 VPS39Q96JC1 886 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 ZNF560Q96MR9 790 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 MLPHQ9BV36 600 aaPredicted RBP13.18□□□□□ -0.3
PTCD2-212ENST00000543322 C1QTNF1Q9BXJ1 281 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 SNX25Q9H3E2 840 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 ELP3Q9H9T3 547 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 NDUFA13Q9P0J0 144 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 STAP1Q9ULZ2 295 aa13.18□□□□□ -0.3
PTCD2-212ENST00000543322 TXNDC9O14530 226 aa13.17□□□□□ -0.3
PTCD2-212ENST00000543322 CXCL11O14625 94 aa13.17□□□□□ -0.3
PTCD2-212ENST00000543322 ATP9BO43861 1147 aa13.17□□□□□ -0.3
PTCD2-212ENST00000543322 ADSLP30566 484 aaPredicted RBP13.17□□□□□ -0.3
PTCD2-212ENST00000543322 SERPINB5P36952 375 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms