RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 UPF3AQ9H1J1 476 aaKnown RBP4.88□□□□□ -1.63
MDM2-228ENST00000542502 KLC4Q9NSK0 619 aa4.88□□□□□ -1.63
MDM2-228ENST00000542502 JKAMPQ9P055 326 aa4.88□□□□□ -1.63
MDM2-228ENST00000542502 COL20A1Q9P218 1284 aa4.88□□□□□ -1.63
MDM2-228ENST00000542502 DDX25Q9UHL0 483 aaKnown RBP4.88□□□□□ -1.63
MDM2-228ENST00000542502 TUBD1Q9UJT1 453 aa4.88□□□□□ -1.63
MDM2-228ENST00000542502 OGDHLQ9ULD0 1010 aa4.88□□□□□ -1.63
MDM2-228ENST00000542502 INTUQ9ULD6 942 aa4.88□□□□□ -1.63
MDM2-228ENST00000542502 KCNJ14Q9UNX9 436 aa4.88□□□□□ -1.63
MDM2-228ENST00000542502 MORC2Q9Y6X9 1032 aaPredicted RBP4.88□□□□□ -1.63
MDM2-228ENST00000542502 ELP1O95163 1332 aa4.88□□□□□ -1.63
MDM2-228ENST00000542502 HTTP42858 3142 aa4.88□□□□□ -1.63
MDM2-228ENST00000542502 LCTP09848 1927 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 MYH9P35579 1960 aaKnown RBP4.87□□□□□ -1.63
MDM2-228ENST00000542502 LRRC37A2A6NM11 1700 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 VPS37CA5D8V6 355 aaPredicted RBP4.87□□□□□ -1.63
MDM2-228ENST00000542502 E7ENX8 843 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 TOR1BO14657 336 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 NEMFO60524 1076 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 URI1O94763 535 aaPredicted RBP4.87□□□□□ -1.63
MDM2-228ENST00000542502 IL33O95760 270 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 SUPT20HL2P0C7V6 817 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 PRPHP41219 470 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 CDC42EP1Q00587 391 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 MC2RQ01718 297 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 TAP2Q03519 686 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 PIGFQ07326 219 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 TARDBPQ13148 414 aaKnown RBP eCLIP4.87□□□□□ -1.63
MDM2-228ENST00000542502 NPY5RQ15761 445 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 CALCRLQ16602 461 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 LETM2Q2VYF4 491 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 CELF3Q5SZQ8 465 aaKnown RBP4.87□□□□□ -1.63
MDM2-228ENST00000542502 FAM160B1Q5W0V3 765 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 SUMO4Q6EEV6 95 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 MIS18BP1Q6P0N0 1132 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 SEPT14Q6ZU15 432 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 PIK3AP1Q6ZUJ8 805 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 RSPH3Q86UC2 560 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 TLK2Q86UE8 772 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 OR6J1Q8NGC5 347 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 NEK9Q8TD19 979 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 SEPT1Q8WYJ6 367 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 ATP6V0A1Q93050 837 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 ABHD8Q96I13 439 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 FAM167AQ96KS9 214 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 AK8Q96MA6 479 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 GLT1D1Q96MS3 346 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 SPATA33Q96N06 139 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 DEFB118Q96PH6 123 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 JPH2Q9BR39 696 aaPredicted RBP4.87□□□□□ -1.63
MDM2-228ENST00000542502 PYM1Q9BRP8 204 aaKnown RBP4.87□□□□□ -1.63
MDM2-228ENST00000542502 TEKT3Q9BXF9 490 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 KRTAP1-5Q9BYS1 174 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 SMARCAD1Q9H4L7 1026 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 AZI2Q9H6S1 392 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 TDP1Q9NUW8 608 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 ERAP1Q9NZ08 941 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 GABBR1Q9UBS5 961 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 SLC9A2Q9UBY0 812 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 PADI4Q9UM07 663 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 PCDHA12Q9UN75 941 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 CEP290O15078 2479 aa4.87□□□□□ -1.63
MDM2-228ENST00000542502 ZSWIM8A7E2V4 1837 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 LOXHD1Q8IVV2 1947 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 IGLV3-22A0A075B6J6 115 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 RRN3P2A6NIE6 340 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 NDUFS2O75306 463 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 SLC43A1O75387 559 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 GGPS1O95749 300 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 XRCC6P12956 609 aaKnown RBP eCLIP4.86□□□□□ -1.634e-12■□□□□ 9.3
MDM2-228ENST00000542502 LPOP22079 712 aaPredicted RBP4.86□□□□□ -1.63
MDM2-228ENST00000542502 UBA1P22314 1058 aaKnown RBP4.86□□□□□ -1.63
MDM2-228ENST00000542502 CCND3P30281 292 aaPredicted RBP4.86□□□□□ -1.63
MDM2-228ENST00000542502 POU6F2P78424 691 aaPredicted RBP4.86□□□□□ -1.63
MDM2-228ENST00000542502 ST3GAL1Q11201 340 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 PPP2R5CQ13362 524 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 FLYWCH1Q4VC44 716 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 HAUS3Q68CZ6 603 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 C11orf87Q6NUJ2 197 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 NFRKBQ6P4R8 1299 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 ZNF365Q70YC5 407 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 EPM2AIP1Q7L775 607 aaPredicted RBP4.86□□□□□ -1.63
MDM2-228ENST00000542502 OTUD6AQ7L8S5 288 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 PLPPR4Q7Z2D5 763 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 FBXO16Q8IX29 292 aaPredicted RBP4.86□□□□□ -1.63
MDM2-228ENST00000542502 KLHDC9Q8NEP7 349 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 IFI44Q8TCB0 444 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 KCNG4Q8TDN1 519 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 CCDC34Q96HJ3 373 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 LRIG1Q96JA1 1093 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 PBKQ96KB5 322 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 AIFM3Q96NN9 605 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 MTG1Q9BT17 334 aaPredicted RBP4.86□□□□□ -1.63
MDM2-228ENST00000542502 PACSIN1Q9BY11 444 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 IMPG2Q9BZV3 1241 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 AGO4Q9HCK5 861 aaKnown RBP4.86□□□□□ -1.63
MDM2-228ENST00000542502 ANLNQ9NQW6 1124 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 NRBP2Q9NSY0 501 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 PCDHA10Q9Y5I2 948 aa4.86□□□□□ -1.63
MDM2-228ENST00000542502 ASTN1O14525 1302 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms