RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 MOCS3O95396 460 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 CER1O95813 267 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 PRKCSHP14314 528 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 CHRNB2P17787 502 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 C5AR1P21730 350 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 SCNN1AP37088 669 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 ADPRHP54922 357 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 RACK1P63244 317 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 SULT2A1Q06520 285 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 TPD52L1Q16890 204 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 PRAMEF14Q5SWL7 426 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 TTC39BQ5VTQ0 682 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 RBM43Q6ZSC3 357 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 CCDC117Q8IWD4 279 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 FAM114A1Q8IWE2 563 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 TMEM35BQ8NCS4 154 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 OR2T34Q8NGX1 318 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 ENOX1Q8TC92 643 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 RNF34Q969K3 372 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 C18orf8Q96DM3 657 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 C1orf74Q96LT6 269 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 SLC6A18Q96N87 628 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 RPRD1AQ96P16 312 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 NOX5Q96PH1 765 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 TBCBQ99426 244 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 STK33Q9BYT3 514 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 TKTL2Q9H0I9 626 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 NUP62CLQ9H1M0 184 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 GANQ9H2C0 597 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 IGLV3-10A0A075B6K4 115 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 FAM170AA1A519 330 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 FAM47DPA6NHR8 397 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 EPHB6O15197 1021 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 LATO43561 262 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 PCDHGA12O60330 932 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 RNASEH1O60930 286 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 CLDN11O75508 207 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 ZNF821O75541 412 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 RNASEH2AO75792 299 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 ENDOD1O94919 500 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 MMEP08473 750 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 ATXN1LP0C7T5 689 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 FLT3P36888 993 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 PSMD8P48556 350 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 KLK7P49862 253 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 CCR5P51681 352 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 CDH4P55283 916 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 RNASE9P60153 205 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 ZNF177Q13360 481 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 ELAVL3Q14576 367 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 DLG2Q15700 870 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 SLC25A52Q3SY17 297 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 RAB6CQ53S08 254 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 BRMS1LQ5PSV4 323 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 RABGAP1LQ5R372 815 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 CDKAL1Q5VV42 579 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 TAF3Q5VWG9 929 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 CCNI2Q6ZMN8 369 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 SND1Q7KZF4 910 aaKnown RBP eCLIP12.14□□□□□ -0.477e-8■■■■□ 26.2
CLSTN3-211ENST00000541667 SH2D3CQ8N5H7 860 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 GPT2Q8TD30 523 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 EPS8L1Q8TE68 723 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 RHBDD1Q8TEB9 315 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 SETD7Q8WTS6 366 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 SPAG5Q96R06 1193 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 OMDQ99983 421 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 SIK2Q9H0K1 926 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 RAB6CQ9H0N0 254 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 WDCPQ9H6R7 721 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 RRN3Q9NYV6 651 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 NOCTQ9UK39 431 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 PCDHB9Q9Y5E1 797 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 PTPRBP23467 1997 aa12.14□□□□□ -0.47
CLSTN3-211ENST00000541667 ARID1BQ8NFD5 2236 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 A0A0D9SEW6 157 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 A0A1B0GTQ1 180 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 TMEM8BA6NDV4 472 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 SRRM3A6NNA2 597 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 F8VZ95 297 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 K7ERQ8 282 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 MCF2LO15068 1137 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 SMAD6O43541 496 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 SNAP91O60641 907 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 ADH1BP00325 375 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 IL1BP01584 269 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 CYP1A1P04798 512 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 CTSLP07711 333 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 EEF1GP26641 437 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 OXCT1P55809 520 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 JAM2P57087 298 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 SNX16P57768 344 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 TAS2R38P59533 333 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 PPP2CBP62714 309 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 PPP2CAP67775 309 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 NOMO3P69849 1222 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 MTA1Q13330 715 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 RAPGEF1Q13905 1077 aa12.13□□□□□ -0.47
CLSTN3-211ENST00000541667 TEAD4Q15561 434 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms