RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ITGB3P05106 788 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ITGAVP06756 1048 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 CKMT2P17540 419 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ACO1P21399 889 aaKnown RBP4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ABCB4P21439 1286 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 YWHAQP27348 245 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 POLR2BP30876 1174 aaKnown RBP4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ZNF165P49910 485 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 TUBP50607 506 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 COPAP53621 1224 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 BCAT1P54687 386 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 SLC12A3P55017 1021 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 C21orf59P57076 290 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ERVPABLB-1P60509 514 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 RBP5P82980 135 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 TFAMQ00059 246 aaKnown RBP4.85□□□□□ -1.63
SNHG1-214ENST00000540865 IL9RQ01113 521 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 CYP27A1Q02318 531 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 DNAJC3Q13217 504 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 SERINC3Q13530 473 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 SOWAHAQ2M3V2 549 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 TMEM201Q5SNT2 666 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 HYIQ5T013 277 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 FBXW10Q5XX13 1052 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 SLC6A19Q695T7 634 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 OGFOD3Q6PK18 319 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 CRELD2Q6UXH1 353 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ATG14Q6ZNE5 492 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ADAT2Q7Z6V5 191 aaKnown RBP4.85□□□□□ -1.63
SNHG1-214ENST00000540865 CSGALNACT2Q8N6G5 542 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 CXorf38Q8TB03 319 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 MYCBPAPQ8TBZ2 947 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 SAP25Q8TEE9 199 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 CACTINQ8WUQ7 758 aaKnown RBP4.85□□□□□ -1.63
SNHG1-214ENST00000540865 KCNE4Q8WWG9 221 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 SNX19Q92543 992 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 SKA1Q96BD8 255 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 NAF1Q96HR8 494 aaKnown RBP4.85□□□□□ -1.63
SNHG1-214ENST00000540865 BBS2Q9BXC9 721 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ACE2Q9BYF1 805 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-214ENST00000540865 TRIM4Q9C037 500 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 FOXP1Q9H334 677 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-214ENST00000540865 C6orf106Q9H6K1 298 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-214ENST00000540865 CRTAC1Q9NQ79 661 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ITGA11Q9UKX5 1188 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ODF2LQ9ULJ1 636 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 CLCA2Q9UQC9 943 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 SLC27A6Q9Y2P4 619 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 SNX9Q9Y5X1 595 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ADAMTS9Q9P2N4 1935 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ARID1BQ8NFD5 2236 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-214ENST00000540865 DOPEY2Q9Y3R5 2298 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 CITO14578 2027 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 HELZP42694 1942 aaKnown RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 MYO16Q9Y6X6 1858 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 NPHP3-ACAD11A0A0J9YXS1 232 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 SLC22A31A6NKX4 558 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 PP2D1A8MPX8 630 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 K7ENP7 123 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 KLK10O43240 276 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 ATE1O95260 518 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 SEMA4FO95754 770 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 MT-CO3P00414 261 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 AFPP02771 609 aaKnown RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 FAM163BP0C2L3 166 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 ZDHHC11BP0C7U3 371 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 PLA2G4BP0C869 781 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 WARSP23381 471 aaKnown RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 LMO2P25791 158 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 ACSL1P33121 698 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 PRPHP41219 470 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 LSSP48449 732 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 NASPP49321 788 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 ARRB1P49407 418 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 ZNF131P52739 623 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 GP2P55259 537 aaKnown RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 CDH8P55286 799 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 PSMC1P62191 440 aaKnown RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 ASIC1P78348 528 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 GTF2BQ00403 316 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 E2F1Q01094 437 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 ZBTB16Q05516 673 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 GRIN1Q05586 938 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 NFATC3Q12968 1075 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 EIF4HQ15056 248 aaKnown RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 POSTNQ15063 836 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 ANKRD1Q15327 319 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 SHBQ15464 509 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 ARSHQ5FYA8 562 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 MDH1BQ5I0G3 518 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 KCNT1Q5JUK3 1230 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 LETMD1Q6P1Q0 360 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 INO80CQ6PI98 192 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 CDH24Q86UP0 819 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 FAM124AQ86V42 546 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 GATAD2AQ86YP4 633 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 BRSK2Q8IWQ3 736 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 NUP93Q8N1F7 819 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 MYCT1Q8N699 235 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 EID2Q8N6I1 236 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms