RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 STK19P49842 368 aaPredicted RBP12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 CDK17Q00537 523 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 PDCLQ13371 301 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 MORC3Q14149 939 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 C6orf118Q5T5N4 469 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 SFMBT2Q5VUG0 894 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 ISM2Q6H9L7 571 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 CXorf57Q6NSI4 855 aaKnown RBP12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 TRIM69Q86WT6 500 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 CACTIN-AS1Q8N1I8 211 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 OR8D1Q8WZ84 308 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 LRIG1Q96JA1 1093 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 SLC2A13Q96QE2 648 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 UBE2TQ9NPD8 197 aaPredicted RBP12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 ARHGAP20Q9P2F6 1191 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 CYTH4Q9UIA0 394 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 CTNND2Q9UQB3 1225 aa12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 FASNP49327 2511 aaKnown RBP12.37□□□□□ -0.43
CBX3P4-202ENST00000540428 URB1O60287 2271 aaKnown RBP12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 TMEM131Q92545 1883 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 C1QTNF3-AMACRE9PGA6 284 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 MCF2LO15068 1137 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 THAP12O43422 761 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 HSF2BPO75031 334 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 FGFR1OPO95684 399 aaKnown RBP12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 PPP2CBP62714 309 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 PPP2CAP67775 309 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 PITX1P78337 314 aaPredicted RBP12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 PAK1Q13153 545 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 DNAJC3Q13217 504 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 EFHC1Q5JVL4 640 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 FBXL22Q6P050 247 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 KANSL1Q7Z3B3 1105 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 EID2Q8N6I1 236 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 ALG14Q96F25 216 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 RPRD1AQ96P16 312 aaPredicted RBP12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 NRSN2Q9GZP1 204 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 FAM204AQ9H8W3 233 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 DDIT4Q9NX09 232 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 SLC25A13Q9UJS0 675 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 PPM1HQ9ULR3 514 aa12.36□□□□□ -0.43
CBX3P4-202ENST00000540428 PLK4O00444 970 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 RNGTTO60942 597 aaKnown RBP12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 RTN2O75298 545 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 VAV1P15498 845 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 CKMT2P17540 419 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 ABCG1P45844 678 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 BNIP3Q12983 259 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 AUHQ13825 339 aaKnown RBP12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 STAT4Q14765 748 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 RTP5Q14D33 572 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 TAF5Q15542 800 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 C5orf22Q49AR2 442 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 SETMARQ53H47 684 aaPredicted RBP12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 HES3Q5TGS1 186 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 AGBL4Q5VU57 503 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 FBXL19Q6PCT2 694 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 TRIM65Q6PJ69 517 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 CIR1Q86X95 450 aaPredicted RBP12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 SPATS2Q86XZ4 545 aaKnown RBP12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 DEFB106AQ8N104 65 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 RFFLQ8WZ73 363 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 RNF34Q969K3 372 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 SRRTQ9BXP5 876 aaKnown RBP12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 PREBQ9HCU5 417 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 SARDHQ9UL12 918 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 PCDHGC3Q9UN70 934 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 PLXNA2O75051 1894 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 ITPR1Q14643 2758 aa12.35□□□□□ -0.43
CBX3P4-202ENST00000540428 GOLGA4Q13439 2230 aaKnown RBP12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 BECN2A8MW95 431 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 PRAMEF26H0Y7S4 382 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 CBX4O00257 560 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 CLDN11O75508 207 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 METAP1P53582 386 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 STX17P56962 302 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 SNX16P57768 344 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 CNTN1Q12860 1018 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 TARDBPQ13148 414 aaKnown RBP eCLIP12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 ZNF177Q13360 481 aaPredicted RBP12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 DLG2Q15700 870 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 ACCSLQ4AC99 568 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 NEK5Q6P3R8 708 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 WDTC1Q8N5D0 677 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 SH2D3CQ8N5H7 860 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 PIP4K2CQ8TBX8 421 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 PPP1R13BQ96KQ4 1090 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 BBC3Q96PG8 261 aaPredicted RBP12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 NOX5Q96PH1 765 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 CPXM1Q96SM3 734 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 FEM1AQ9BSK4 669 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 ACP6Q9NPH0 428 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 TMEM51Q9NW97 253 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 APEX2Q9UBZ4 518 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 HS3ST2Q9Y278 367 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 TBC1D30Q9Y2I9 924 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 OR51B4Q9Y5P0 310 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 HS3ST4Q9Y661 456 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms