RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 BHLHE22Q8NFJ8 381 aaPredicted RBP20.73■□□□□ 0.91
TMEM260-203ENST00000539559 LRGUKQ96M69 825 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 ATXN10Q9UBB4 475 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 HSFX1Q9UBD0 423 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 CDY2AQ9Y6F7 541 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 CDY1Q9Y6F8 540 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 TK2O00142 265 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 CNMDO75829 334 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 SRGAP2BP0DMP2 458 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 MYL4P12829 197 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 NELFEP18615 380 aaKnown RBP20.72■□□□□ 0.91
TMEM260-203ENST00000539559 LSM12Q3MHD2 195 aaKnown RBP20.72■□□□□ 0.91
TMEM260-203ENST00000539559 NXNQ6DKJ4 435 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 ZNF567Q8N184 647 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 OR6B3Q8NGW1 331 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 DGCR14Q96DF8 476 aaKnown RBP20.72■□□□□ 0.91
TMEM260-203ENST00000539559 MFSD3Q96ES6 412 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 BTBD9Q96Q07 612 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 SMIM31A0A1B0GVY4 71 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 CEACAM7Q14002 265 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 PDK1Q15118 436 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 DBN1Q16643 649 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 FAM219BQ5XKK7 198 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 ZFP28Q8NHY6 868 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 PKP2Q99959 881 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 STK39Q9UEW8 545 aa20.72■□□□□ 0.91
TMEM260-203ENST00000539559 ATP9BO43861 1147 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 POLBP06746 335 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 ARSAP15289 507 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 GLDCP23378 1020 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 NR2C2P49116 596 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 RBP5P82980 135 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 GLRA4Q5JXX5 417 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 C4orf22Q6V702 233 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 CYS1Q717R9 158 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 PID1Q7Z2X4 250 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 MARVELD2Q8N4S9 558 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 ZSCAN18Q8TBC5 510 aaPredicted RBP20.71■□□□□ 0.91
TMEM260-203ENST00000539559 PRDM12Q9H4Q4 367 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 GNEQ9Y223 722 aaKnown RBP20.71■□□□□ 0.91
TMEM260-203ENST00000539559 IQCA1LA6NCM1 817 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 PCSK6P29122 969 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 AVPR1AP37288 418 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 MAP7Q14244 749 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 MPHOSPH6Q99547 160 aaKnown RBP20.71■□□□□ 0.91
TMEM260-203ENST00000539559 RBBP8Q99708 897 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 VRTNQ9H8Y1 702 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 TXNRD2Q9NNW7 524 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 RBPJLQ9UBG7 517 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 AKT3Q9Y243 479 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 USP3Q9Y6I4 520 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 PEX1O43933 1283 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 C2P06681 752 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 TPH1P17752 444 aa20.71■□□□□ 0.91
TMEM260-203ENST00000539559 RPL5P46777 297 aaKnown RBP20.71■□□□□ 0.91
TMEM260-203ENST00000539559 TGFB3P10600 412 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 MLNP12872 115 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 ZFXP17010 805 aaPredicted RBP20.7■□□□□ 0.9
TMEM260-203ENST00000539559 ARL4AP40617 200 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 ADGRE1Q14246 886 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 INSCQ1MX18 579 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 ZNF423Q2M1K9 1284 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 CERCAMQ5T4B2 595 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 BNC2Q6ZN30 1099 aaPredicted RBP20.7■□□□□ 0.9
TMEM260-203ENST00000539559 SPATA6LQ8N4H0 392 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 KYQ8NBH2 561 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 FAM149B1Q96BN6 582 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 TMA16Q96EY4 203 aaKnown RBP20.7■□□□□ 0.9
TMEM260-203ENST00000539559 KLHL32Q96NJ5 620 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 NPAS2Q99743 824 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 PDGFCQ9NRA1 345 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 RIMS3Q9UJD0 308 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 PHF24Q9UPV7 400 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 DENRO43583 198 aaKnown RBP20.7■□□□□ 0.9
TMEM260-203ENST00000539559 TRIM13O60858 407 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 GARSP41250 739 aaKnown RBP20.7■□□□□ 0.9
TMEM260-203ENST00000539559 CCDC153Q494R4 210 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 DNAAF3Q8N9W5 541 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 FAM96AQ9H5X1 160 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 NMRAL1Q9HBL8 299 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 PRMT7Q9NVM4 692 aaPredicted RBP20.7■□□□□ 0.9
TMEM260-203ENST00000539559 GALNT8Q9NY28 637 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 UBP1Q9NZI7 540 aa20.7■□□□□ 0.9
TMEM260-203ENST00000539559 C6orf203Q9P0P8 240 aaPredicted RBP20.7■□□□□ 0.9
TMEM260-203ENST00000539559 TMEM233B4DJY2 109 aa20.69■□□□□ 0.9
TMEM260-203ENST00000539559 PHGDHO43175 533 aaKnown RBP20.69■□□□□ 0.9
TMEM260-203ENST00000539559 DESP17661 470 aa20.69■□□□□ 0.9
TMEM260-203ENST00000539559 IFRD2Q12894 506 aaPredicted RBP20.69■□□□□ 0.9
TMEM260-203ENST00000539559 GPR162Q16538 588 aa20.69■□□□□ 0.9
TMEM260-203ENST00000539559 NRF1Q16656 503 aa20.69■□□□□ 0.9
TMEM260-203ENST00000539559 CELF3Q5SZQ8 465 aaKnown RBP20.69■□□□□ 0.9
TMEM260-203ENST00000539559 RARS2Q5T160 578 aaKnown RBP20.69■□□□□ 0.9
TMEM260-203ENST00000539559 AMIGO2Q86SJ2 522 aa20.69■□□□□ 0.9
TMEM260-203ENST00000539559 URGCPQ8TCY9 931 aa20.69■□□□□ 0.9
TMEM260-203ENST00000539559 DTNBP1Q96EV8 351 aa20.69■□□□□ 0.9
TMEM260-203ENST00000539559 CPNE1Q99829 537 aa20.69■□□□□ 0.9
TMEM260-203ENST00000539559 FERMT1Q9BQL6 677 aa20.69■□□□□ 0.9
TMEM260-203ENST00000539559 C11orf84Q9BUA3 381 aaPredicted RBP20.69■□□□□ 0.9
TMEM260-203ENST00000539559 SEMA6AQ9H2E6 1030 aa20.69■□□□□ 0.9
TMEM260-203ENST00000539559 ASB7Q9H672 318 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms