RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 OTOP3Q7RTS5 596 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 SERINC5Q86VE9 423 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 LRRTM3Q86VH5 581 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 RBM15BQ8NDT2 890 aaKnown RBP25.43■■□□□ 1.66
RAB40C-204ENST00000538492 TEKT5Q96M29 485 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 CCDC106Q9BWC9 280 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 DCLRE1BQ9H816 532 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 PNPOQ9NVS9 261 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.43■■□□□ 1.66
RAB40C-204ENST00000538492 GPR182O15218 404 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 SERPINE1P05121 402 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 SESN3P58005 492 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 CDK18Q07002 472 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 ACSBG2Q5FVE4 666 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 INTS6LQ5JSJ4 861 aaKnown RBP25.42■■□□□ 1.66
RAB40C-204ENST00000538492 PM20D1Q6GTS8 502 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 BRD8Q9H0E9 1235 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 C20orf96Q9NUD7 363 aaPredicted RBP25.42■■□□□ 1.66
RAB40C-204ENST00000538492 DFFAO00273 331 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 PTDSS1P48651 473 aaKnown RBP25.42■■□□□ 1.66
RAB40C-204ENST00000538492 LIMK2P53671 638 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 ITGA9Q13797 1035 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 PPP2R5DQ14738 602 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 DBN1Q16643 649 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 FAM171BQ6P995 826 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 RPAINQ86UA6 219 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 OR10T2Q8NGX3 314 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 ACBD6Q9BR61 282 aa25.42■■□□□ 1.66
RAB40C-204ENST00000538492 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.41■■□□□ 1.66
RAB40C-204ENST00000538492 ERI2A8K979 691 aaKnown RBP25.41■■□□□ 1.66
RAB40C-204ENST00000538492 F8W810 466 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 SERPINA6P08185 405 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 YY1P25490 414 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 IRF9Q00978 393 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 INSCQ1MX18 579 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 DCLRE1AQ6PJP8 1040 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 KCNMB4Q86W47 210 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 METTL23Q86XA0 190 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 SORT1Q99523 831 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 DMAP1Q9NPF5 467 aaPredicted RBP25.41■■□□□ 1.66
RAB40C-204ENST00000538492 TAGLN3Q9UI15 199 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 MANSC4A6NHS7 340 aaPredicted RBP25.41■■□□□ 1.66
RAB40C-204ENST00000538492 ITGB1P05556 798 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 RALBP11234 206 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 SERPINB8P50452 374 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 TAF11Q15544 211 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 PLCD3Q8N3E9 789 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 CNTD1Q8N815 330 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 ACVR1CQ8NER5 493 aa25.41■■□□□ 1.66
RAB40C-204ENST00000538492 ZSCAN18Q8TBC5 510 aaPredicted RBP25.41■■□□□ 1.66
RAB40C-204ENST00000538492 IARS2Q9NSE4 1012 aaKnown RBP25.41■■□□□ 1.66
RAB40C-204ENST00000538492 CPA3P15088 417 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 NMBRP28336 390 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 CDC25CP30307 473 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 MGAT3Q09327 533 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 TMPRSS6Q8IU80 811 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 SPATA22Q8NHS9 363 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 PPP4R1Q8TF05 950 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 IRGQQ8WZA9 623 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 MYCBPQ99417 103 aaPredicted RBP25.4■■□□□ 1.66
RAB40C-204ENST00000538492 TDRD15B5MCY1 1934 aaKnown RBP25.4■■□□□ 1.66
RAB40C-204ENST00000538492 TTC3P53804 2025 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 KPNA6O60684 536 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 KRT36O76013 467 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 RCN1Q15293 331 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 MAVSQ7Z434 540 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 MRPL10Q7Z7H8 261 aaKnown RBP25.4■■□□□ 1.66
RAB40C-204ENST00000538492 IFNL1Q8IU54 200 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 SH3TC2Q8TF17 1288 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 FAM161BQ96MY7 647 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 VAT1Q99536 393 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 CXorf56Q9H5V9 222 aa25.4■■□□□ 1.66
RAB40C-204ENST00000538492 A0A096LPK6 155 aa25.39■■□□□ 1.66
RAB40C-204ENST00000538492 TUBB3Q13509 450 aa25.39■■□□□ 1.66
RAB40C-204ENST00000538492 CD300LGQ6UXG3 332 aa25.39■■□□□ 1.66
RAB40C-204ENST00000538492 ADAM28Q9UKQ2 775 aa25.39■■□□□ 1.66
RAB40C-204ENST00000538492 SPECC1L-ADORA2AF8WAN1 911 aa25.39■■□□□ 1.65
RAB40C-204ENST00000538492 ZNF189O75820 626 aaPredicted RBP25.39■■□□□ 1.65
RAB40C-204ENST00000538492 MAGEA12P43365 314 aa25.39■■□□□ 1.65
RAB40C-204ENST00000538492 PGFP49763 221 aa25.39■■□□□ 1.65
RAB40C-204ENST00000538492 MPP3Q13368 585 aa25.39■■□□□ 1.65
RAB40C-204ENST00000538492 NAA25Q14CX7 972 aa25.39■■□□□ 1.65
RAB40C-204ENST00000538492 VWA5B1Q5TIE3 1220 aa25.39■■□□□ 1.65
RAB40C-204ENST00000538492 DPF3Q92784 378 aa25.39■■□□□ 1.65
RAB40C-204ENST00000538492 CLPTM1LQ96KA5 538 aa25.39■■□□□ 1.65
RAB40C-204ENST00000538492 IL22Q9GZX6 179 aa25.39■■□□□ 1.65
RAB40C-204ENST00000538492 MMADHCQ9H3L0 296 aaPredicted RBP25.39■■□□□ 1.65
RAB40C-204ENST00000538492 SFMBT1Q9UHJ3 866 aa25.39■■□□□ 1.65
RAB40C-204ENST00000538492 NUDT5Q9UKK9 219 aa25.39■■□□□ 1.65
RAB40C-204ENST00000538492 MSI1O43347 362 aaKnown RBP25.38■■□□□ 1.65
RAB40C-204ENST00000538492 LMNAP02545 664 aaKnown RBP25.38■■□□□ 1.65
RAB40C-204ENST00000538492 GRK2P25098 689 aa25.38■■□□□ 1.65
RAB40C-204ENST00000538492 NPY2RP49146 381 aa25.38■■□□□ 1.65
RAB40C-204ENST00000538492 PGGT1BP53609 377 aa25.38■■□□□ 1.65
RAB40C-204ENST00000538492 MXRA7P84157 204 aa25.38■■□□□ 1.65
RAB40C-204ENST00000538492 OVOS1Q6IE37 1185 aa25.38■■□□□ 1.65
RAB40C-204ENST00000538492 OXCT2Q9BYC2 517 aaPredicted RBP25.38■■□□□ 1.65
RAB40C-204ENST00000538492 APOBEC2Q9Y235 224 aaKnown RBP25.38■■□□□ 1.65
RAB40C-204ENST00000538492 MT-CYBP00156 380 aaPredicted RBP25.38■■□□□ 1.65
RAB40C-204ENST00000538492 SAT1P21673 171 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms