RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 TEPSINQ96N21 525 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 MRPL9Q9BYD2 267 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 WDR11Q9BZH6 1224 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 NRBP2Q9NSY0 501 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 CORINQ9Y5Q5 1042 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 ST14Q9Y5Y6 855 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 A0A1B0GTW7 788 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 LRRIQ4A6NIV6 560 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 ZC3H11AO75152 810 aaKnown RBP eCLIP11.09□□□□□ -0.632e-6■■■■■ 37.4
CLSTN3-207ENST00000537408 SORBS2O94875 1100 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 COX4I1P13073 169 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 BDNFP23560 247 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 POLR2BP30876 1174 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 GJC1P36383 396 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 SERPINB10P48595 397 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 TMBIM6P55061 237 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 HSPA14Q0VDF9 509 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 HERC3Q15034 1050 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 TREML2Q5T2D2 321 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 TICAM1Q8IUC6 712 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 PAF1Q8N7H5 531 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 AGO2Q9UKV8 859 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 TRAF6Q9Y4K3 522 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 PTCH2Q9Y6C5 1203 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 POTEMA6NI47 508 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 E5RJQ4 531 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 SMIM22K7EJ46 135 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 ADAMTS3O15072 1205 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 CFLARO15519 480 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 DYRK3O43781 588 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 MFN2O95140 757 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 ICAM1P05362 532 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 PLA2G4BP0C869 781 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 PRKCAP17252 672 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 NUDT2P50583 147 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 NKX2-5P52952 324 aaPredicted RBP11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 IFITM2Q01629 132 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 RAB39AQ14964 217 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 FASTKD3Q14CZ7 662 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 SNX17Q15036 470 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 PLEKHG7Q6ZR37 379 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 PRR23CQ6ZRP0 262 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 ZC3H7AQ8IWR0 971 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 RAB2BQ8WUD1 216 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 GIMAP1Q8WWP7 306 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 BTBD6Q96KE9 485 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 PSKH2Q96QS6 385 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 DOK1Q99704 481 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 SENP7Q9BQF6 1050 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 ACP6Q9NPH0 428 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 MRPL40Q9NQ50 206 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 SNTG2Q9NY99 539 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 PKD2L2Q9NZM6 624 aa11.09□□□□□ -0.63
CLSTN3-207ENST00000537408 PRKACAP17612 351 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 POLR2CP19387 275 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 KCNA4P22459 653 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 CTAG1AP78358 180 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 CACNB1Q02641 598 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 ZNF746Q6NUN9 644 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 SHKBP1Q8TBC3 707 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 PEX13Q92968 403 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 TXNDC15Q96J42 360 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 ZNF597Q96LX8 424 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 CDK5RAP1Q96SZ6 601 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 TUBA1CQ9BQE3 449 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 NPLQ9BXD5 320 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 SEC24DO94855 1032 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 RALAP11233 206 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 GZMAP12544 262 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 CDH1P12830 882 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 AASDHQ4L235 1098 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 C16orf46Q6P387 395 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 ARMC8Q8IUR7 673 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 PPWD1Q96BP3 646 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 UQCC2Q9BRT2 126 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 COQ10BQ9H8M1 238 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 OLAHQ9NV23 265 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 GMIPQ9P107 970 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 UBA2Q9UBT2 640 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 DUOX1Q9NRD9 1551 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 MYH3P11055 1940 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 MEIS1O00470 390 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 AIM2O14862 343 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 SNX2O60749 519 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 ETV4P43268 484 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 FMO5P49326 533 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 NEDD8Q15843 81 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 TTC39BQ5VTQ0 682 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 DPY19L2P1Q6NXN4 242 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 KYQ8NBH2 561 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 ACDQ96AP0 544 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 CHID1Q9BWS9 393 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 CALN1Q9BXU9 219 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 CPNE5Q9HCH3 593 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 CHORDC1Q9UHD1 332 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 ANAPC7Q9UJX3 599 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 PSME2Q9UL46 239 aa11.08□□□□□ -0.64
CLSTN3-207ENST00000537408 AKAP3O75969 853 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 NADKO95544 446 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 TSHRP16473 764 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms