RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 TM9SF1O15321 606 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 USP12O75317 370 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 SNRPAP09012 282 aaKnown RBP23.19■■□□□ 1.3
HMGA2-206ENST00000536545 CLTBP09497 229 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 NEK3P51956 506 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 RING1Q06587 406 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 LRRC49Q8IUZ0 686 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 CCDC197Q8NCU1 140 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 UBE2OQ9C0C9 1292 aaKnown RBP23.19■■□□□ 1.3
HMGA2-206ENST00000536545 LRRC40Q9H9A6 602 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 RC3H2Q9HBD1 1191 aaKnown RBP23.19■■□□□ 1.3
HMGA2-206ENST00000536545 TMEM248Q9NWD8 314 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 SAMD15Q9P1V8 674 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 MRPL42Q9Y6G3 142 aaKnown RBP23.19■■□□□ 1.3
HMGA2-206ENST00000536545 SLC12A8A0AV02 714 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 OR1D2P34982 312 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 CCNFP41002 786 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 PDK4Q16654 411 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 TIGD7Q6NT04 549 aaPredicted RBP23.19■■□□□ 1.3
HMGA2-206ENST00000536545 UNC5BQ8IZJ1 945 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 UMODL1-AS1Q8N2C9 162 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 USP33Q8TEY7 942 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 PAIP2Q9BPZ3 127 aaKnown RBP23.19■■□□□ 1.3
HMGA2-206ENST00000536545 ZYG11BQ9C0D3 744 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 CCSER2Q9H7U1 834 aa23.19■■□□□ 1.3
HMGA2-206ENST00000536545 TLR5O60602 858 aa23.18■■□□□ 1.3
HMGA2-206ENST00000536545 SERPINB9P50453 376 aa23.18■■□□□ 1.3
HMGA2-206ENST00000536545 PAPOLAP51003 745 aaKnown RBP23.18■■□□□ 1.3
HMGA2-206ENST00000536545 NAB1Q13506 487 aa23.18■■□□□ 1.3
HMGA2-206ENST00000536545 PRPSAP1Q14558 356 aa23.18■■□□□ 1.3
HMGA2-206ENST00000536545 ITIH4Q14624 930 aa23.18■■□□□ 1.3
HMGA2-206ENST00000536545 ZNF449Q6P9G9 518 aa23.18■■□□□ 1.3
HMGA2-206ENST00000536545 LVRNQ6Q4G3 990 aa23.18■■□□□ 1.3
HMGA2-206ENST00000536545 OTOP3Q7RTS5 596 aa23.18■■□□□ 1.3
HMGA2-206ENST00000536545 YTHDF3Q7Z739 585 aaKnown RBP23.18■■□□□ 1.3
HMGA2-206ENST00000536545 TCP10LQ8TDR4 215 aa23.18■■□□□ 1.3
HMGA2-206ENST00000536545 ZNF689Q96CS4 500 aaPredicted RBP23.18■■□□□ 1.3
HMGA2-206ENST00000536545 MTBPQ96DY7 904 aa23.18■■□□□ 1.3
HMGA2-206ENST00000536545 ELAC2Q9BQ52 826 aaKnown RBP23.18■■□□□ 1.3
HMGA2-206ENST00000536545 SNX3O60493 162 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 KRT38O76015 456 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 PYGBP11216 843 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 NDST2P52849 883 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 ZKSCAN8Q15776 578 aaPredicted RBP23.17■■□□□ 1.3
HMGA2-206ENST00000536545 SPANXN3Q5MJ09 141 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 LGSNQ5TDP6 509 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 HHATQ5VTY9 493 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 TOP1MTQ969P6 601 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 FCRL5Q96RD9 977 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 CLSTN3Q9BQT9 956 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 GLOD4Q9HC38 313 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 WBP1LQ9NX94 342 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 ZNF212Q9UDV6 495 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 AFF4Q9UHB7 1163 aaKnown RBP23.17■■□□□ 1.3
HMGA2-206ENST00000536545 ABHD14A-ACY1A0A1B0GW23 586 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 HMX2A2RU54 273 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 PSMD3O43242 534 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 SOD2P04179 222 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 POLBP06746 335 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 ALADP13716 330 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 ADRA1DP25100 572 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 TUFMP49411 452 aaKnown RBP23.17■■□□□ 1.3
HMGA2-206ENST00000536545 IFT88Q13099 833 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 BMPR2Q13873 1038 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 FRG1Q14331 258 aaKnown RBP23.17■■□□□ 1.3
HMGA2-206ENST00000536545 ALFQ53S48 1182 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 ACBD5Q5T8D3 534 aaPredicted RBP23.17■■□□□ 1.3
HMGA2-206ENST00000536545 RAP1GAP2Q684P5 730 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 FBXL22Q6P050 247 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 TFAP2DQ7Z6R9 452 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 SLC39A11Q8N1S5 342 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 ZNF276Q8N554 614 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 CABS1Q96KC9 395 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 HERC2P3Q9BVR0 1158 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 MKS1Q9NXB0 559 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 BFARQ9NZS9 450 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 SLC17A7Q9P2U7 560 aa23.17■■□□□ 1.3
HMGA2-206ENST00000536545 MAGED2Q9UNF1 606 aaPredicted RBP23.17■■□□□ 1.3
HMGA2-206ENST00000536545 LPXNO60711 386 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 RFPL1O75677 317 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 CNTN5O94779 1100 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 HLA-DQB2P05538 268 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 CORO7P57737 925 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 NAPEPLDQ6IQ20 393 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 CGB2Q6NT52 195 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 OVCA2Q8WZ82 227 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 FATE1Q969F0 183 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 IGSF8Q969P0 613 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 ZNF558Q96NG5 402 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 CDK5RAP1Q96SZ6 601 aaKnown RBP23.16■■□□□ 1.3
HMGA2-206ENST00000536545 SLC17A6Q9P2U8 582 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 HSFX1Q9UBD0 423 aa23.16■■□□□ 1.3
HMGA2-206ENST00000536545 IPO11Q9UI26 975 aaKnown RBP23.16■■□□□ 1.3
HMGA2-206ENST00000536545 HBS1LQ9Y450 684 aaKnown RBP23.16■■□□□ 1.3
HMGA2-206ENST00000536545 DRGXA6NNA5 263 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 C2CD2LO14523 706 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 SEC24AO95486 1093 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 PEX11BO96011 259 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 HMBSP08397 361 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 DHRS4L1P0CG22 281 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms