RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 MAN1C1Q9NR34 630 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 SNX15Q9NRS6 342 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 HOMER2Q9NSB8 354 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 RIC8BQ9NVN3 520 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 ZNF358Q9NW07 568 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 TMEM9Q9P0T7 183 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 SERPINA10Q9UK55 444 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 CCPG1Q9ULG6 757 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 CNOT6Q9ULM6 557 aaKnown RBP7.07□□□□□ -1.28
CPSF7-215ENST00000536145 TMEM98Q9Y2Y6 226 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 TCAF1Q9Y4C2 921 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 AP4S1Q9Y587 144 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 SSC5DA1L4H1 1573 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 UBR3Q6ZT12 1888 aa7.07□□□□□ -1.28
CPSF7-215ENST00000536145 PTPRFP10586 1907 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 TARM1B6A8C7 271 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 H3BMQ9 156 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 K7EPI3 171 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 POLRMTO00411 1230 aaKnown RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 NOP56O00567 594 aaKnown RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 PAPSS1O43252 624 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 MED7O43513 233 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 SNAP91O60641 907 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 MICAL2O94851 1124 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 HSPA4LO95757 839 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 APBA3O96018 575 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 LTFP02788 710 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 MPOP05164 745 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 APRTP07741 180 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 HOXC6P09630 235 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 OCM2P0CE71 109 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 OCMP0CE72 109 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 ENO3P13929 434 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 PGAM1P18669 254 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 CYP3A5P20815 502 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 TTKP33981 857 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 MSX2P35548 267 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 SERPINB5P36952 375 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 TNFSF9P41273 254 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 GPD2P43304 727 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 GJA8P48165 433 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 LIMK2P53671 638 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 BCAR1P56945 870 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 C21orf59P57076 290 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 PRKCQQ04759 706 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 TRIM25Q14258 630 aaKnown RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 PTK2BQ14289 1009 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 EMC2Q15006 297 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 SURF1Q15526 300 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 KIZQ2M2Z5 673 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 CCDC14Q49A88 953 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 DCAF6Q58WW2 860 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 INTS11Q5TA45 600 aaKnown RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 STRIP1Q5VSL9 837 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 GRAMD4Q6IC98 578 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 ABHD15Q6UXT9 468 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 ZPBP2Q6X784 338 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 HACD2Q6Y1H2 254 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 FASTKD5Q7L8L6 764 aaKnown RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 ERMP1Q7Z2K6 904 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 PODNQ7Z5L7 613 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 SPRED1Q7Z699 444 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 TTC30AQ86WT1 665 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 ZNF354CQ86Y25 554 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 MYO1HQ8N1T3 1032 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 DCLK2Q8N568 766 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 SCAIQ8N9R8 606 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 TERB1Q8NA31 727 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 RDH11Q8TC12 318 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 LPGAT1Q92604 370 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 USP13Q92995 863 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 ATP6V0A1Q93050 837 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 EME1Q96AY2 570 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 COG8Q96MW5 612 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 AGAP3Q96P47 875 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 TBCBQ99426 244 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 MPHOSPH6Q99547 160 aaKnown RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 RBBP8Q99708 897 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 CPNE1Q99829 537 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 ZNF670Q9BS34 389 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 TMEM79Q9BSE2 394 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 MSTO1Q9BUK6 570 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 SNRNP25Q9BV90 132 aaKnown RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 C1QTNF1Q9BXJ1 281 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 FTHL17Q9BXU8 183 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 YTHDF1Q9BYJ9 559 aaKnown RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 ELOVL4Q9GZR5 314 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 PAIP1Q9H074 479 aaKnown RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 UNC93B1Q9H1C4 597 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 VPS33BQ9H267 617 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 EFCAB1Q9HAE3 211 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 MRPL40Q9NQ50 206 aaKnown RBP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 PXMP2Q9NR77 195 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.06□□□□□ -1.28
CPSF7-215ENST00000536145 ARMC1Q9NVT9 282 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 GPATCH2LQ9NWQ4 482 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 OXSMQ9NWU1 459 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 GIN1Q9NXP7 522 aa7.06□□□□□ -1.28
CPSF7-215ENST00000536145 NCKIPSDQ9NZQ3 722 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms