RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 CAMK1DQ8IU85 385 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 PSTKQ8IV42 348 aaKnown RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 HSFY1Q96LI6 401 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 SPATA13Q96N96 652 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 SPATA7Q9P0W8 599 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 VPS51Q9UID3 782 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 LRRIQ1Q96JM4 1722 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 CBX4O00257 560 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 INPP4BO15327 924 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 BIRC5O15392 142 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 SYNCRIPO60506 623 aaKnown RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 CCNT2O60583 730 aaKnown RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 ALDH2P05091 517 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 PCNAP12004 261 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 ADRA1DP25100 572 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 PSMB9P28065 219 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 SERPINH1P50454 418 aaKnown RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 TUBP50607 506 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 ALDH5A1P51649 535 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 PPIDQ08752 370 aaKnown RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 PPIL2Q13356 520 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 C15orf59Q2T9L4 293 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 ARMC4Q5T2S8 1044 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 PRAMEF18Q5VWM3 479 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 C15orf52Q6ZUT6 534 aaKnown RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 HDDC2Q7Z4H3 204 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 MILR1Q7Z6M3 343 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 DEFB106AQ8N104 65 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 TSEN2Q8NCE0 465 aaKnown RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 LPCAT1Q8NF37 534 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 METTL6Q8TCB7 284 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 ART4Q93070 314 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 TMEM159Q96B96 161 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 PORCNQ9H237 461 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 RAD18Q9NS91 495 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 SNTG2Q9NY99 539 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 ARHGAP28Q9P2N2 729 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 CNTNAP2Q9UHC6 1331 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 TNS2Q63HR2 1409 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 TTLL13PA6NNM8 815 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 DCDC2CA8MYV0 355 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 H7C0S8 307 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 UBXN8O00124 270 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 VAPBO95292 243 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 CYP2A6P11509 494 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 POU1F1P28069 291 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 PLIN5Q00G26 463 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 AMPD2Q01433 879 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 CBWD6Q4V339 395 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 CBWD3Q5JTY5 395 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 CBWD5Q5RIA9 395 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 ATAD3BQ5T9A4 648 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 FAM228AQ86W67 206 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 PHF13Q86YI8 300 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 ZDHHC13Q8IUH4 622 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 ADHFE1Q8IWW8 467 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 FAM71AQ8IYT1 594 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 NKAPQ8N5F7 415 aaKnown RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 ALLCQ8N6M5 410 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 DRAXINQ8NBI3 349 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 FIG4Q92562 907 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 PHF21BQ96EK2 531 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 CDRT15Q96T59 188 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 MTG1Q9BT17 334 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 MRPL9Q9BYD2 267 aaKnown RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 CHST7Q9NS84 486 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 UXTQ9UBK9 157 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-236ENST00000533667 PCDHA11Q9Y5I1 949 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 SF3B1O75533 1304 aaKnown RBP eCLIP7.13□□□□□ -1.275e-6■■■■■ 59.8
CTNND1-236ENST00000533667 NFASCO94856 1347 aa7.13□□□□□ -1.27
CTNND1-236ENST00000533667 LIASO43766 372 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 CLTBP09497 229 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 YBX3P16989 372 aaKnown RBP eCLIP7.12□□□□□ -1.279e-12■□□□□ 9.1
CTNND1-236ENST00000533667 LBPP18428 481 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 OR1E1P30953 314 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 HPCAL1P37235 193 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 GUCA1AP43080 201 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ZNF143P52747 638 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 AUHQ13825 339 aaKnown RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 SQLEQ14534 574 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 PDK4Q16654 411 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 GSTA3Q16772 222 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 FAM187BQ17R55 369 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 TTMPQ5BVD1 217 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 LRRC55Q6ZSA7 311 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ANKRD23Q86SG2 305 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 C10orf53Q8N6V4 93 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ITFG1Q8TB96 612 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 FAM45AQ8TCE6 357 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 B3GALT6Q96L58 329 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 DEPDC7Q96QD5 511 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 OSMRQ99650 979 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 CCDC28BQ9BUN5 200 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 XPNPEP3Q9NQH7 507 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 UBA2Q9UBT2 640 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ATXN2Q99700 1313 aaKnown RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 LACTBL1A8MY62 500 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 IGSF6O95976 241 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 LTFP02788 710 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 GSTM1P09488 218 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms