RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	IPO11	Q9UI26	975 aa	Known RBP	5.4	□□□□□ -1.54
ECHDC1-222	ENST00000531967	ITGA11	Q9UKX5	1188 aa		5.4	□□□□□ -1.54
ECHDC1-222	ENST00000531967	SNX14	Q9Y5W7	946 aa		5.4	□□□□□ -1.54
ECHDC1-222	ENST00000531967		A0A087WWL8	130 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	GAGE10	A6NGK3	116 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	LINC01387	J3KSC0	135 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CASC3	O15234	703 aa	Known RBP	5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	POP4	O95707	220 aa	Known RBP	5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ZFY	P08048	801 aa	Predicted RBP	5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	GABRB1	P18505	474 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	IL13	P35225	146 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PIK3CG	P48736	1102 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CLCNKA	P51800	687 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	VCP	P55072	806 aa	Known RBP	5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	MFAP4	P55083	255 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SLC6A3	Q01959	620 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DPYS	Q14117	519 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SLC29A2	Q14542	456 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ZNF273	Q14593	569 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ZNF766	Q5HY98	468 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	RTP2	Q5QGT7	225 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CBWD5	Q5RIA9	395 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SLFN12L	Q6IEE8	588 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SARM1	Q6SZW1	724 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	MAMDC4	Q6UXC1	1216 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CEP128	Q6ZU80	1094 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DENND6A	Q8IWF6	608 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	MCEMP1	Q8IX19	187 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DDIAS	Q8IXT1	998 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	KRT222	Q8N1A0	295 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DNAJC5G	Q8N7S2	189 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	GPR156	Q8NFN8	814 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TEKT4	Q8WW24	435 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	C19orf60	Q96EN9	201 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SAMD8	Q96LT4	415 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	MRPL1	Q9BYD6	325 aa	Known RBP	5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TRIM2	Q9C040	744 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TINAGL1	Q9GZM7	467 aa	Predicted RBP	5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	RNF32	Q9H0A6	362 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	KCNH6	Q9H252	994 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PALMD	Q9NP74	551 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	NDFIP2	Q9NV92	336 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TMEM184C	Q9NVA4	438 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	RIC8B	Q9NVN3	520 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ARHGEF38	Q9NXL2	777 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SMPD3	Q9NY59	655 aa	Predicted RBP	5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ANKMY1	Q9P2S6	941 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DKK4	Q9UBT3	224 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	BAIAP2L1	Q9UHR4	511 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CAPN11	Q9UMQ6	739 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SLC6A14	Q9UN76	642 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PCDHB6	Q9Y5E3	794 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	WDR97	A6NE52	1622 aa		5.4	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ABCA5	Q8WWZ7	1642 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	C1QTNF9B	B2RNN3	333 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	MTX2	O75431	263 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SLCO2B1	O94956	709 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SMC2	O95347	1197 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	IL1A	P01583	271 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	KLKB1	P03952	638 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	WEE2	P0C1S8	567 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CCDC192	P0DO97	292 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ARL1	P40616	181 aa	Predicted RBP	5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	WNT5A	P41221	380 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PRRX1	P54821	245 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	EIF3B	P55884	814 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	RIPK4	P57078	832 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TAP2	Q03519	686 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	RAPSN	Q13702	412 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	LETM2	Q2VYF4	491 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	LRRC23	Q53EV4	343 aa	Predicted RBP	5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PLAG1	Q6DJT9	500 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DBX2	Q6ZNG2	339 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SGMS1	Q86VZ5	419 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PHC2	Q8IXK0	858 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	KDM8	Q8N371	416 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	FSTL5	Q8N475	847 aa	Predicted RBP	5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CDYL2	Q8N8U2	506 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CAMKV	Q8NCB2	501 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	WDR60	Q8WVS4	1066 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	HMGB4	Q8WW32	186 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	C11orf24	Q96F05	449 aa	Predicted RBP	5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	KLHDC7B	Q96G42	594 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PIWIL1	Q96J94	861 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	NUDCD1	Q96RS6	583 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	HNRNPAB	Q99729	332 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	MMTAG2	Q9BU76	263 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ATXN3L	Q9H3M9	355 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	MTG2	Q9H4K7	406 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PARVG	Q9HBI0	331 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	FSCN3	Q9NQT6	498 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	NCDN	Q9UBB6	729 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	AMACR	Q9UHK6	382 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	USP21	Q9UK80	565 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PLAGL2	Q9UPG8	496 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DLGAP4	Q9Y2H0	992 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	LOC100653049	A0A140TA62	436 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PMS2P1	A4D2B8	440 aa		5.39	□□□□□ -1.55
ECHDC1-222	ENST00000531967	RANBP6	O60518	1105 aa	Known RBP	5.39	□□□□□ -1.55

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