RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ATPAF2Q8N5M1 289 aa19.51■□□□□ 0.71
SMPD1-205ENST00000531303 FIBINQ8TAL6 211 aa19.51■□□□□ 0.71
SMPD1-205ENST00000531303 SLC35B2Q8TB61 432 aa19.51■□□□□ 0.71
SMPD1-205ENST00000531303 OLFM3Q96PB7 478 aa19.51■□□□□ 0.71
SMPD1-205ENST00000531303 DNAJC17Q9NVM6 304 aaKnown RBP19.51■□□□□ 0.71
SMPD1-205ENST00000531303 CHD5Q8TDI0 1954 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 ILVBLA1L0T0 632 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 ARHGAP42A6NI28 874 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 CCDC188H7C350 402 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 RIOK3O14730 519 aaKnown RBP19.5■□□□□ 0.71
SMPD1-205ENST00000531303 PPP1R12AO14974 1030 aaPredicted RBP19.5■□□□□ 0.71
SMPD1-205ENST00000531303 TRIM24O15164 1050 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 HOXC11O43248 304 aaPredicted RBP19.5■□□□□ 0.71
SMPD1-205ENST00000531303 MX2P20592 715 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 GARSP41250 739 aaKnown RBP19.5■□□□□ 0.71
SMPD1-205ENST00000531303 SLC6A11P48066 632 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 YBEYP58557 167 aaPredicted RBP19.5■□□□□ 0.71
SMPD1-205ENST00000531303 CYP1B1Q16678 543 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 ASTLQ6HA08 431 aaPredicted RBP19.5■□□□□ 0.71
SMPD1-205ENST00000531303 CCDC137Q6PK04 289 aaKnown RBP19.5■□□□□ 0.71
SMPD1-205ENST00000531303 C12orf40Q86WS4 652 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 CCDC105Q8IYK2 499 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 SLC44A3Q8N4M1 653 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 TFB1MQ8WVM0 346 aaKnown RBP19.5■□□□□ 0.71
SMPD1-205ENST00000531303 ARHGEF2Q92974 986 aaKnown RBP19.5■□□□□ 0.71
SMPD1-205ENST00000531303 XPO6Q96QU8 1125 aaKnown RBP19.5■□□□□ 0.71
SMPD1-205ENST00000531303 TMEM121Q9BTD3 319 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 FRMD8P1Q9BZ68 369 aaPredicted RBP19.5■□□□□ 0.71
SMPD1-205ENST00000531303 MAGEH1Q9H213 219 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 ABCB8Q9NUT2 735 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 KIAA1522Q9P206 1035 aaPredicted RBP19.5■□□□□ 0.71
SMPD1-205ENST00000531303 RAD54BQ9Y620 910 aa19.5■□□□□ 0.71
SMPD1-205ENST00000531303 ITPRIPL2Q3MIP1 535 aa19.49■□□□□ 0.71
SMPD1-205ENST00000531303 PARP15Q460N3 678 aa19.49■□□□□ 0.71
SMPD1-205ENST00000531303 LEKR1Q6ZMV7 388 aa19.49■□□□□ 0.71
SMPD1-205ENST00000531303 APCDD1Q8J025 514 aa19.49■□□□□ 0.71
SMPD1-205ENST00000531303 C12orf50Q8NA57 414 aaPredicted RBP19.49■□□□□ 0.71
SMPD1-205ENST00000531303 NOA1Q8NC60 698 aaKnown RBP19.49■□□□□ 0.71
SMPD1-205ENST00000531303 CSGALNACT1Q8TDX6 532 aa19.49■□□□□ 0.71
SMPD1-205ENST00000531303 QKIQ96PU8 341 aaKnown RBP eCLIP19.49■□□□□ 0.71
SMPD1-205ENST00000531303 ATP13A1Q9HD20 1204 aa19.49■□□□□ 0.71
SMPD1-205ENST00000531303 SEPT10Q9P0V9 454 aa19.49■□□□□ 0.71
SMPD1-205ENST00000531303 IGSF9Q9P2J2 1179 aa19.49■□□□□ 0.71
SMPD1-205ENST00000531303 IPO11Q9UI26 975 aaKnown RBP19.49■□□□□ 0.71
SMPD1-205ENST00000531303 VPS28Q9UK41 221 aa19.49■□□□□ 0.71
SMPD1-205ENST00000531303 TCF20Q9UGU0 1960 aaKnown RBP19.49■□□□□ 0.71
SMPD1-205ENST00000531303 J3KR12 359 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 SGK1O00141 431 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 NCAM2O15394 837 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 SLU7O95391 586 aaKnown RBP19.48■□□□□ 0.71
SMPD1-205ENST00000531303 GLDCP23378 1020 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 RBL1P28749 1068 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 HLA-FP30511 346 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 CHRNA3P32297 505 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 SOX9P48436 509 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 OXCT1P55809 520 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 XRCC4Q13426 336 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 SLC45A4Q5BKX6 768 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 RNF43Q68DV7 783 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 NAIF1Q69YI7 327 aaPredicted RBP19.48■□□□□ 0.71
SMPD1-205ENST00000531303 GSTA5Q7RTV2 222 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 CDKL3Q8IVW4 592 aaPredicted RBP19.48■□□□□ 0.71
SMPD1-205ENST00000531303 NKD2Q969F2 451 aaPredicted RBP19.48■□□□□ 0.71
SMPD1-205ENST00000531303 NXPE3Q969Y0 559 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 FEM1AQ9BSK4 669 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 AMACRQ9UHK6 382 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 HACD1B0YJ81 288 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 LOC730098B7Z3J9 87 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 CBX4O00257 560 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 ARNTLO00327 626 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 KCNN4O15554 427 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 CACNG3O60359 315 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 TULP3O75386 442 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 VAV1P15498 845 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 GJA4P35212 333 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 KDSRQ06136 332 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 SERINC3Q13530 473 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 OASLQ15646 514 aaKnown RBP19.48■□□□□ 0.71
SMPD1-205ENST00000531303 GAB4Q2WGN9 574 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 PRUNE1Q86TP1 453 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 CCDC13Q8IYE1 715 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 FAM71DQ8N9W8 422 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 ATL2Q8NHH9 583 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 HDAC11Q96DB2 347 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 SP110Q9HB58 689 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 HPCAL4Q9UM19 191 aa19.48■□□□□ 0.71
SMPD1-205ENST00000531303 UNC80Q8N2C7 3258 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 KCNK1O00180 336 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 NARSO43776 548 aaKnown RBP19.47■□□□□ 0.71
SMPD1-205ENST00000531303 SNAP91O60641 907 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 MAFKO60675 156 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 IFNB1P01574 187 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 ETFBP38117 255 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 FNTAP49354 379 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 DGKGP49619 791 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 NRLP54845 237 aa19.47■□□□□ 0.71
SMPD1-205ENST00000531303 PPIDQ08752 370 aaKnown RBP19.47■□□□□ 0.71
SMPD1-205ENST00000531303 PRKD1Q15139 912 aaPredicted RBP19.47■□□□□ 0.71
SMPD1-205ENST00000531303 HEATR6Q6AI08 1181 aaKnown RBP19.47■□□□□ 0.71
SMPD1-205ENST00000531303 DRICH1Q6PGQ1 229 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms