RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ATP9BO43861 1147 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 SH3BP5O60239 455 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 SNAP91O60641 907 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 CLDN11O75508 207 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 ENDOD1O94919 500 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 MT-CO1P00395 513 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 F9P00740 461 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 UNGP13051 313 aaPredicted RBP10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 STAT1P42224 750 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 PSMD8P48556 350 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 VASPP50552 380 aaPredicted RBP10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 GALCP54803 685 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 CDH4P55283 916 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 SULT2A1Q06520 285 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 FOXC1Q12948 553 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 KIF19Q2TAC6 998 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 CCDC14Q49A88 953 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 TTC31Q49AM3 519 aaPredicted RBP10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 CCDC183Q5T5S1 534 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 KIAA0895LQ68EN5 471 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 NCEH1Q6PIU2 408 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 LAYNQ6UX15 382 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 ZNF677Q86XU0 584 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 HDDC3Q8N4P3 179 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 JOSD2Q8TAC2 188 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 GANCQ8TET4 914 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 SNX19Q92543 992 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 C1orf74Q96LT6 269 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 TM9SF3Q9HD45 589 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 METTL5Q9NRN9 209 aaKnown RBP10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 MPP6Q9NZW5 540 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 ZNF212Q9UDV6 495 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 SARDHQ9UL12 918 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 FNDC3AQ9Y2H6 1198 aaKnown RBP10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 IGF2RP11717 2491 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 KMT2BQ9UMN6 2715 aaPredicted RBP10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 IGLV3-10A0A075B6K4 115 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 A0A0D9SEW6 157 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 K7ERQ8 282 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 KCNK3O14649 394 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 WNT9AO14904 365 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 RNASEH1O60930 286 aaKnown RBP10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 RNASEH2AO75792 299 aaKnown RBP10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 CD27P26842 260 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 RDXP35241 583 aaKnown RBP10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 DRD3P35462 400 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 OXCT1P55809 520 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 ATP11AP98196 1134 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 UBXN1Q04323 297 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 TYRO3Q06418 890 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 MTA1Q13330 715 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 DLG2Q15700 870 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 C15orf59Q2T9L4 293 aaPredicted RBP10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 HLA-BQ31612 363 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 ARCQ7LC44 396 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 FAM131BQ86XD5 332 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 SH2D3CQ8N5H7 860 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 RXFP2Q8WXD0 754 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 FAM131CQ96AQ9 280 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 SPAG5Q96R06 1193 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 ERGIC2Q96RQ1 377 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 C11orf70Q9BRQ4 267 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 ZDHHC5Q9C0B5 715 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 GAREM1Q9H706 876 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 OSGEPQ9NPF4 335 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 ADAMTS1Q9UHI8 967 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 VPS28Q9UK41 221 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 PPM1HQ9ULR3 514 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 SCML1Q9UN30 329 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 NCKAP1Q9Y2A7 1128 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 SNX11Q9Y5W9 270 aa10.72□□□□□ -0.69
PRPF40B-204ENST00000527253 A0A1W2PPC4 97 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 TCRBV5S1A1TA0A578 114 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 FAM47DPA6NHR8 397 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 C2CD4BA6NLJ0 364 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 E9PAM4 449 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 GOLGA6L22H0YM25 854 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 TEX33O43247 280 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 SMAD6O43541 496 aaKnown RBP10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 SRGAP2O75044 1071 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 CBFA2T3O75081 653 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 MBD3O95983 291 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 IL1BP01584 269 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 WNT1P04628 370 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 TPM2P07951 284 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 RHOCP08134 193 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 SRCP12931 536 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 GOT1P17174 413 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 C5AR1P21730 350 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 GLDCP23378 1020 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 AFF3P51826 1226 aaKnown RBP10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 SIM1P81133 766 aaPredicted RBP10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 SLC14A1Q13336 389 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 ELAVL3Q14576 367 aaKnown RBP10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 CLEC16AQ2KHT3 1053 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 LINGO4Q6UY18 593 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 DBX2Q6ZNG2 339 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 Q6ZVU0 165 aa10.71□□□□□ -0.69
PRPF40B-204ENST00000527253 SND1Q7KZF4 910 aaKnown RBP eCLIP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms