RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 POLGP54098 1239 aaPredicted RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 CLNS1AP54105 237 aaKnown RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 CCDC15Q0P6D6 951 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 LRRC74AQ0VAA2 488 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 TRAF1Q13077 416 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 PPP2R5CQ13362 524 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 ATP1A4Q13733 1029 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 RAB30Q15771 203 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 P3H1Q32P28 736 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 ZNF260Q3ZCT1 412 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 ZACNQ401N2 412 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 ODF2Q5BJF6 829 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 PCID2Q5JVF3 399 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 ATPAF1Q5TC12 328 aaPredicted RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 ABRAXAS1Q6UWZ7 409 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 GBP6Q6ZN66 633 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 Q6ZWC4 215 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 CCDC80Q76M96 950 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 KRT27Q7Z3Y8 459 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 KCTD20Q7Z5Y7 419 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 IQCA1Q86XH1 822 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 SLC44A2Q8IWA5 706 aaPredicted RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 LRRC43Q8N309 656 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 ZNF713Q8N859 430 aaPredicted RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 SPATA5Q8NB90 893 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 NAXEQ8NCW5 288 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 FAM76AQ8TAV0 307 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 MGARPQ8TDB4 240 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 ANKRD49Q8WVL7 239 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.41□□□□□ -1.86
COPB1-205ENST00000526527 OVCA2Q8WZ82 227 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 CCT6BQ92526 530 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 SLC39A13Q96H72 371 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 FAR2Q96K12 515 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 HS6ST2Q96MM7 605 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 FYTTD1Q96QD9 318 aaKnown RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 SERINC2Q96SA4 455 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 PRPF18Q99633 342 aaKnown RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 CRB3Q9BUF7 120 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 FSD1LQ9BXM9 530 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 LRRCC1Q9C099 1032 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 VPS16Q9H269 839 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 RABEP2Q9H5N1 569 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 VEZTQ9HBM0 779 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 DUSP22Q9NRW4 184 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 MRGBPQ9NV56 204 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 LRFN1Q9P244 771 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 CFDP1Q9UEE9 299 aaPredicted RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 CDC23Q9UJX2 597 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 MTUS1Q9ULD2 1270 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 TRAF3IP3Q9Y228 551 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 UBE2J1Q9Y385 318 aaPredicted RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 KIF3AQ9Y496 699 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 FNDC1Q4ZHG4 1894 aaPredicted RBP3.41□□□□□ -1.86
COPB1-205ENST00000526527 UHRF1BP1LA0JNW5 1464 aa3.41□□□□□ -1.86
COPB1-205ENST00000526527 COL15A1P39059 1388 aa3.4□□□□□ -1.86
COPB1-205ENST00000526527 CCDC187A0A096LP49 1063 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 SMIM35A0A1B0GVV1 85 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 TTC34A8MYJ7 566 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 KCNU1A8MYU2 1149 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 H7C1Q1 480 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 SYT5O00445 386 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 POLR3GO15318 223 aaPredicted RBP3.4□□□□□ -1.87
COPB1-205ENST00000526527 NEMFO60524 1076 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 TSC22D2O75157 780 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 TBCAO75347 108 aaKnown RBP3.4□□□□□ -1.87
COPB1-205ENST00000526527 ERLIN1O75477 346 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 GCATO75600 419 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 USP1O94782 785 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 CSTBP04080 98 aaKnown RBP3.4□□□□□ -1.87
COPB1-205ENST00000526527 RHOXF2BP0C7M4 288 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 TNNT1P13805 278 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 NPPBP16860 134 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 TRIM21P19474 475 aaKnown RBP3.4□□□□□ -1.87
COPB1-205ENST00000526527 IL4RP24394 825 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 GABRB3P28472 473 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 ARHGAP25P42331 645 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 MMP13P45452 471 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 RENBPP51606 427 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 CSE1LP55060 971 aaKnown RBP3.4□□□□□ -1.87
COPB1-205ENST00000526527 EVCP57679 992 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 KRT83P78385 493 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 E2F1Q01094 437 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 ZBTB16Q05516 673 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 TNIP1Q15025 636 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 PPP2R5BQ15173 497 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 RABEP1Q15276 862 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 CNGA3Q16281 694 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 TRIM71Q2Q1W2 868 aaKnown RBP3.4□□□□□ -1.87
COPB1-205ENST00000526527 PTCHD3Q3KNS1 767 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 CCDC38Q502W7 563 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 MIDNQ504T8 468 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 TTC19Q6DKK2 380 aaPredicted RBP3.4□□□□□ -1.87
COPB1-205ENST00000526527 ABLIM2Q6H8Q1 611 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 IRGCQ6NXR0 463 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 KLHL17Q6TDP4 642 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 VSTM1Q6UX27 236 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 SERPINA13PQ6UXR4 307 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 CCDC91Q7Z6B0 441 aa3.4□□□□□ -1.87
COPB1-205ENST00000526527 ANKRD18AQ8IVF6 992 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms