RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 LMAN2Q12907 356 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 PIN1Q13526 163 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 NECTIN1Q15223 517 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 LRRC41Q15345 812 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 RBMS2Q15434 407 aaKnown RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 ALX1Q15699 326 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 ADCK5Q3MIX3 580 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 ANO6Q4KMQ2 910 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 SBK1Q52WX2 424 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 TATDN1Q6P1N9 297 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 TMED8Q6PL24 325 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 RASGRP2Q7LDG7 609 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 TICAM2Q86XR7 235 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 SAMD14Q8IZD0 417 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 MPP5Q8N3R9 675 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 NRACQ8N912 160 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 OSR1Q8TAX0 266 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 ZKSCAN4Q969J2 545 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 PPP2R3CQ969Q6 453 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 VCPIP1Q96JH7 1222 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 PPP1R9BQ96SB3 815 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 VN1R3Q9BXE9 311 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 CRNKL1Q9BZJ0 848 aaKnown RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 ZNF518BQ9C0D4 1074 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 EBF3Q9H4W6 596 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 ZMAT3Q9HA38 289 aaKnown RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 SMURF2Q9HAU4 748 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 GBA2Q9HCG7 927 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 TRIM36Q9NQ86 728 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 SNX15Q9NRS6 342 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 ATP8A2Q9NTI2 1148 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 MCM9Q9NXL9 1143 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 GAR1Q9NY12 217 aaKnown RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 PI4KBQ9UBF8 816 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 ZNF112Q9UJU3 913 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 ANAPC4Q9UJX5 808 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 DRG1Q9Y295 367 aaKnown RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 KIAA1217Q5T5P2 1943 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 DOCK5Q9H7D0 1870 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 LRRC37A2A6NM11 1700 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 TCHHQ07283 1943 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 IGKV6D-41A0A0C4DH26 115 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 A0A1W2PRG0 241 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 FAM90A10PA6NDY2 464 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 E7EWF7 191 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 CCP110O43303 1012 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 TBC1D4O60343 1298 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 NMT2O60551 498 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 CBSLP0DN79 551 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 CPA1P15085 419 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 IBSPP21815 317 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-208ENST00000524652 EPHA3P29320 983 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 PRKAR1BP31321 381 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 CCKBRP32239 447 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 HSPA4P34932 840 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 CBSP35520 551 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 TDO2P48775 406 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 TNFAIP1Q13829 316 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 VGLL4Q14135 290 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 LARS2Q15031 903 aaKnown RBP3.39□□□□□ -1.87
CSDE1-208ENST00000524652 INSCQ1MX18 579 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 KIAA1755Q5JYT7 1200 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 B3GNT9Q6UX72 402 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 DEF8Q6ZN54 512 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 CYB5R4Q7L1T6 521 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 CHST3Q7LGC8 479 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 IRF2BP2Q7Z5L9 587 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 ZDHHC17Q8IUH5 632 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 SLC35G2Q8TBE7 412 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 STAG1Q8WVM7 1258 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 CTHRC1Q96CG8 243 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 NT5C1BQ96P26 610 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 TAAR9Q96RI9 348 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 ACO2Q99798 780 aaKnown RBP3.39□□□□□ -1.87
CSDE1-208ENST00000524652 TRIM5Q9C035 493 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 NAPBQ9H115 298 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 DHX36Q9H2U1 1008 aaKnown RBP3.39□□□□□ -1.87
CSDE1-208ENST00000524652 A1CFQ9NQ94 594 aaKnown RBP3.39□□□□□ -1.87
CSDE1-208ENST00000524652 MTMR4Q9NYA4 1195 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 TMOD2Q9NZR1 351 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 USP22Q9UPT9 525 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 CDY1Q9Y6F8 540 aa3.39□□□□□ -1.87
CSDE1-208ENST00000524652 MYH7BA7E2Y1 1941 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 PLIN4Q96Q06 1357 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 FRMPD3Q5JV73 1810 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 MBD3L4A6NDZ8 208 aaPredicted RBP3.38□□□□□ -1.87
CSDE1-208ENST00000524652 MBD3L3A6NE82 208 aaPredicted RBP3.38□□□□□ -1.87
CSDE1-208ENST00000524652 H3BNC9 293 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 TMPRSS11DO60235 418 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 MARCH6O60337 910 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 OAZ2O95190 189 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 GH2P01242 217 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 KITP10721 976 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 APEHP13798 732 aaKnown RBP3.38□□□□□ -1.87
CSDE1-208ENST00000524652 PRF1P14222 555 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 TKTP29401 623 aaKnown RBP3.38□□□□□ -1.87
CSDE1-208ENST00000524652 THBS4P35443 961 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 NOVP48745 357 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 DIO1P49895 249 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms