RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 IGLV3-25P01717 112 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 RBP3P10745 1247 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 SRFP11831 508 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 LCP1P13796 627 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 HMGA1P17096 107 aaKnown RBP7.28□□□□□ -1.24
VPS11-201ENST00000524454 CD72P21854 359 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 ACTN2P35609 894 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 GJC1P36383 396 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 GRIK1P39086 918 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 TUFMP49411 452 aaKnown RBP7.28□□□□□ -1.24
VPS11-201ENST00000524454 ITGA8P53708 1063 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 EIF3EP60228 445 aaKnown RBP7.28□□□□□ -1.24
VPS11-201ENST00000524454 MRPS25P82663 173 aaKnown RBP7.28□□□□□ -1.24
VPS11-201ENST00000524454 IFFO1Q0D2I5 559 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 IFRD2Q12894 506 aaPredicted RBP7.28□□□□□ -1.24
VPS11-201ENST00000524454 NR1H3Q13133 447 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 SEMA3BQ13214 749 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 STAT4Q14765 748 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 VEPH1Q14D04 833 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 C15orf59Q2T9L4 293 aaPredicted RBP7.28□□□□□ -1.24
VPS11-201ENST00000524454 SMTNL2Q2TAL5 461 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 TNFAIP8L3Q5GJ75 292 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 EFHC2Q5JST6 749 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 KCNT1Q5JUK3 1230 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 DAB2IPQ5VWQ8 1189 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 IZUMO3Q5VZ72 239 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 KAZNQ674X7 775 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 VITQ6UXI7 678 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 CENPUQ71F23 418 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 MTSS1LQ765P7 747 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 TMEM150AQ86TG1 271 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 ITIH5Q86UX2 942 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 TDRPQ86YL5 185 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 RFX6Q8HWS3 928 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 LRRC49Q8IUZ0 686 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 ZNF276Q8N554 614 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 ZMIZ2Q8NF64 920 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 PRSS33Q8NF86 280 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 PCDH19Q8TAB3 1148 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 TTC8Q8TAM2 541 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 UBLCP1Q8WVY7 318 aaPredicted RBP7.28□□□□□ -1.24
VPS11-201ENST00000524454 HSPH1Q92598 858 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 SMARCD2Q92925 531 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 FAM149B1Q96BN6 582 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 TLCD1Q96CP7 247 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 ZFYVE19Q96K21 471 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 GDAP1L1Q96MZ0 367 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 ASB16Q96NS5 453 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 OLFM3Q96PB7 478 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 LRRC3BQ96PB8 259 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 PPP1R2P1Q96PQ5 205 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 QKIQ96PU8 341 aaKnown RBP eCLIP7.28□□□□□ -1.24
VPS11-201ENST00000524454 CSPG4P5Q96PW8 444 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 TRIM31Q9BZY9 425 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 FOXQ1Q9C009 403 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 FBXO44Q9H4M3 255 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 TRPC7Q9HCX4 862 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 ABCC13Q9NSE7 274 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 GDE1Q9NZC3 331 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 IL37Q9NZH6 218 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 SENP1Q9P0U3 644 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 PCSK1NQ9UHG2 260 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 LGALS13Q9UHV8 139 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 HCN4Q9Y3Q4 1203 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 ACTL7BQ9Y614 415 aa7.28□□□□□ -1.24
VPS11-201ENST00000524454 ZFP37Q9Y6Q3 630 aaPredicted RBP7.28□□□□□ -1.24
VPS11-201ENST00000524454 C5orf60A6NFR6 353 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 HEPACAM2A8MVW5 462 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 SGK1O00141 431 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 TNFRSF10BO14763 440 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 CAPN9O14815 690 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 PPP1R12AO14974 1030 aaPredicted RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 ALOX15BO15296 676 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 CDH16O75309 829 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 ECI2O75521 394 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 GCATO75600 419 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 STK10O94804 968 aaKnown RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 RTN3O95197 1032 aaPredicted RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 F11P03951 625 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 DCNP07585 359 aaKnown RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 GSTA2P09210 222 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 SLC2A3P11169 496 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 MLNP12872 115 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 TPSB2P20231 275 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 NR1D1P20393 614 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 MX2P20592 715 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 AVPR2P30518 371 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 GDI1P31150 447 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 HOXC13P31276 330 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 CTHP32929 405 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 PHBP35232 272 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 SERPINB6P35237 376 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 ADRA1BP35368 520 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 CXCR3P49682 368 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 SULT1E1P49888 294 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 ARL4CP56559 192 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 MAP3K7CLP57077 242 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 ATP11AP98196 1134 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 DEUP1Q05D60 604 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 GPS1Q13098 491 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms